Cyprinus carpio (common carp): 109100006
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Entry
109100006 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04020
Calcium signaling pathway
ccar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109100006
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109100006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109100006
Ion channels [BR:
ccar04040
]
Ligand-gated channels
Glutamate (ionotropic)
109100006
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
109100006
NCBI-ProteinID:
XP_018969045
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Position
24:complement(1265865..1294401)
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AA seq
874 aa
AA seq
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MATPQGCWGPSLQLLLFFHLLLNVVPPCQGRPFFGPPTVNVAVVFSGLAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIIGISGGSAVVIPHKAEGSTFLQMGASIEQQINAMFKVMEEYNWGNFIVITSLY
PGYETFVDYIRSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLLGPGYIWVIPSLAVGNPEVSPPDSFPVGVISIITDRWRKTLRQRVRE
GVAVIVKGVHSFHKNKGSIPEGHSDCNSPVKSYANNSLFRHMLNVSWEHKDLSFNADGYL
TNPSMVIIALDRERHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESITGHNEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWXFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDHLDFLLAISRVRLHC
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcaagggtgttggggtccctctcttcaactcctcctgttctttcatctg
ttactcaatgtagtgcctccctgccagggacgtccattcttcggccctcctacggtcaac
gtggctgtggttttcagtggtttggcccaccacagtgagatcaagggccgactgagtcca
gaaaacttcctagacatgcccctggaagtgaaccccatcaccgtgctggtgaatgacact
aaccccagagctttactcacacgtctctgtcagactatggcagcagagagcctccacgga
gtggtgtttgaagatgacgtggactcagaagctgtggcacaaatcttagactttatctcc
tctcagacgtccatccccatcataggcatcagtggaggttctgcagtagtcatcccacat
aaagctgaaggctctacctttctccagatgggagcttctatagagcagcagataaatgcg
atgttcaaagtaatggaggagtacaactggggtaactttatagtgatcaccagcttgtat
cccggctacgagaccttcgtggactacatccgctccttcacagacaccagctacttccta
tgggagctgcaggatgtgctgagctttgagatgtctgtgggggccaatgacatccgcaca
cgaagactactacagcaggtggattcgcaggtatatctagtgtactgttcccacgaggag
gcacagtacttgttcaggatggcctctgatgtggggcttctggggcccggatacatctgg
gtcatccccagtctggctgtggggaaccctgaagtgtcccctcctgacagtttcccagtg
ggcgtcatcagtattatcacagaccgctggaggaaaacactacgccagagggttcgggaa
ggagtcgcagtcatagtaaaaggggtgcacagctttcataagaacaaaggatccattccc
gagggtcacagtgactgcaatagtcctgtcaaatcatacgccaacaattctctcttcagg
catatgctaaatgtctcatgggagcataaggacctctccttcaacgctgatggctatctc
accaatccttccatggtgatcattgctttggatcgagagagacactgggacaaggtagga
agctacgagggagggattctgcagatgcgataccctgtatggccccgttacggcagcttc
ctggagcccgtgtctgacaaccgccacctgactgtggccacgctggaggagaggcctttt
gtcatcgtggagagtgttgatcctgccacaggcacttgtgtgcgcaatactgtgccgtgt
cgtcggcagtccaacaggactgaaagtataacaggtcacaatgagccttacaccaaactc
tgctgcaaaggtttctgcatagacatcctgaagaagctctcacgcaccatcaagttttca
tacgacctttatctggtcacaaatgggaaacatggcaagatggtccgtggcatctggaat
ggcatgattggagaggtcttctacaagcgtgcagatatggcaattggctcgcttaccata
aatgaggagcggtcagagattgttgacttttcagtgccgttcgtggagactgggattagt
gttatggtggccagaagcaatggaacagtctcaccttctgccttcctggagccgtatagt
ccagctgtgtgggttatgatgttcgtaatgtgcctgactgttgtggcagtcaccgtgttc
gtgttcgagtacttcagccctgttggctacaaccggagccttgtcagtgccaaagcccct
gggggtccaaccttcaccattgggaagtctgtctggctcctgtggggaatcgtcttcaac
aactctgttcctattgaaaaccccaaaggcacgaccagtaaaattatggtcctggtctgg
ngcttttttgctgtcattttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtacattgacactgtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcgcttcgggacggtcccaaacggcagcacagagaggaacatt
cgaagcaattaccctgacatgcacacccacatgataaaatacaaccagaaaggagtggaa
gaagctctcaacagccttaagacagggaagttggacgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggatgagggctgcaagctggtcaccattggtagtgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctggctctcctccagttcctgggagatggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaacgaggtcatgagctccaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggccatgggtctcagcctgctggtc
tttgcttgggaacatttactttactggaaactgaggcactccgtccacaagtctgatcac
ttagacttccttctggccattagcagggtaagattgcattgctga
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