Cyprinus carpio (common carp): 109101953
Help
Entry
109101953 CDS
T05134
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04210
Apoptosis
ccar04218
Cellular senescence
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar04625
C-type lectin receptor signaling pathway
ccar04920
Adipocytokine signaling pathway
ccar05132
Salmonella infection
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109101953
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109101953
04218 Cellular senescence
109101953
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109101953
04621 NOD-like receptor signaling pathway
109101953
04622 RIG-I-like receptor signaling pathway
109101953
04623 Cytosolic DNA-sensing pathway
109101953
04625 C-type lectin receptor signaling pathway
109101953
09152 Endocrine system
04920 Adipocytokine signaling pathway
109101953
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109101953
09171 Infectious disease: bacterial
05132 Salmonella infection
109101953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109101953
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109101953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109101953
NCBI-ProteinID:
XP_018970841
LinkDB
All DBs
Position
27:10772616..10799104
Genome browser
AA seq
927 aa
AA seq
DB search
MAGEDPYHGVYMEPIAPFSDDTIWMTMDPTTFPGIHNNNVMRTVDGPYLRIVEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSYPQVKVGLVVQLVTHSTETHLHAHSLVGKQCDKGI
CIADLQSKDSSISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEIDALQGEV
RMPRELTDTERNLISSASIHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDESGLTWEAYGDFSP
TDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGHYFQGYQTYNNYGPGYNFSS
GMGGGGTTIKHAYQEPVEDSDEDSDSDTDNDQTAGGVVRICAHPEPIDLGVASEDTEPTE
NLELNTTCCVLEPHLAELAGRQAQALFHYAVSGDARMLLAPQRPLMTTQDENGDTGLHLG
VIHSQTDAVRNLAQVISALPGEGILNMRNDLYQTPLHLAVLTQHKEAVEALLEAEVDVTL
TDRHGNTALHLAAQQKEDSVLRLLLKYKSVSQLTSIPNTAGLCPLHLAVQANSLSCVRAL
LDGGADVDVQEITCGRTALHLATELGNLSLAGCLLLEGNAYVDSVTYNGSTPLHIAAGRD
STKLCALLMAAGADPHKENFEPLFFKEDELCGTCEEEEEEDEGYIPGTTPMNMATSPEVY
DILNGEEYQLTTTVVPPQGDMKSLSSDTKQELCQALEGQTGGWESLAHALGLGILTSAFR
LSSCPAGKLLDSYEVSGGTVRELVEGLKHVGNSSAVSLLQAMCKEPEAVHTTPQLTGLGL
CKSIQGLTLGPHQEESGICDSGVETSF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggatccataccatggagtgtacatggaacctattgcccctttcagtgat
gacacaatatggatgaccatggacccgacaacgttcccgggcatccacaacaataatgtt
atgaggacagtcgacggaccttatctgcgaattgtcgaacaaccaaaacagaggggcttc
aggttccgctatggatgtgagggcccctcccacggaggactcccaggggcctccagtgag
aagaacaggaagtcttacccacaagtgaaggtaggtttggtagttcagctggtgacccac
tccacagagacccatcttcatgctcacagcctggtgggcaaacagtgcgataaaggaatc
tgcattgccgacttgcagtccaaagattcaagcatcagttttcctaacttgggcattttg
cacgtgacaaagaagaacgtaagtaaagttttggaagagaggatgatcgaggcctacagg
atgggatataactacggcatatccatccatcctgagattgatgccctacaaggagaggtt
cgcatgcccagagaactcacagatactgagaggaacctgattagcagtgcatcaattcat
cagtcaaaggagatggatctgagcgtggtacggctcatgttcacagccttcctgcccgac
agtgacggagggttctcccgccgactggaaccagtcatttcagaccccatctttgacagc
aaggccccaaatgcctccaatctgaagatcgtgcgtatggatcggactgccgggtgtgtg
acgggaggagaggaggtctatctgctgtgtgataaagtccagaaagatgatatccaggtg
cggttttatgaagaagatgagtcgggtctaacctgggaggcctacggggatttctccccc
accgatgtccacagacagtttgccatcgtcttcaagacacctaaatatcgggaccagaat
ctccagaagcccatctctgtgtttgtgcagctaaaaaggaagtcagacaatgaaacgagt
gaacccaagcctttcacctaccatccacagattatagacaaagaagaagtccaaagaaag
agacagaagacactgccaaactttcaggactacagtggagcaggaggaggagctgggggc
atgtttagaggaggagggggtgggtctacagcagggggcggtcccagtggaggaggagga
cattacttccagggatatcaaacctataacaattacgggcctggatacaacttctcctca
ggcatgggaggaggcgggaccaccatcaagcatgcgtatcaagaaccagtggaagacagt
gatgaagacagtgatagtgataccgataatgatcagacagcaggtggggtggtgcgaatc
tgtgcccatcctgaacctattgatttgggagtggcaagtgaggacacagagcctacagaa
aatctggagttaaacaccacatgctgtgtgttagagccgcatttggctgagctagctgga
agacaggctcaagctctctttcattacgcagtaagcggtgatgctagaatgcttctggct
ccacagcgccccctcatgaccactcaagacgagaacggagacacgggtttacatctggga
gtgatccatagtcagacagatgccgtgcgaaatctagcacaagtcatctcggctctcccc
ggagagggcatactcaacatgaggaatgatctgtaccagactcctttgcacctagcagtg
ttgacacagcacaaagaggcggttgaggccttgttggaggccgaggtggatgtcacactc
acagatcgccatggaaacacggcacttcacctggcggctcagcagaaagaggatagcgtg
ctgcgattgctgctaaagtacaaatcagtgtcacaattaaccagcatccccaacacagca
ggtctctgtccgcttcacctggctgtacaggcaaacagtttgagttgtgtgcgagccctg
ctggatggcggggcagatgtggacgttcaggagatcacatgtggccgcacagcacttcac
ctggccacagagctgggaaacctttcccttgccggctgcctcctgctggagggtaatgca
tacgtagacagtgtcacctataatggttcaactcctctgcacattgctgcaggacgtgac
tcaaccaaactgtgcgcgctcctgatggctgcaggagcagatcctcataaagaaaacttt
gaaccactgttcttcaaagaagatgagttgtgtggtacatgtgaggaggaggaggaggaa
gatgaaggctatattcctgggacaacccctatgaacatggcaacctccccagaggtctat
gacattcttaatggagaagagtatcagctcaccaccactgttgttccaccacaaggtgac
atgaagagcttgagctctgacacaaagcaggagctgtgtcaggccctggaaggacagaca
ggaggctgggagagtctggctcatgctctggggcttggcatcctgaccagcgccttcaga
ctcagctcctgccctgctggaaagctgctggacagctatgaggtgtctggaggaacggtg
cgtgagctggttgagggactgaagcatgttgggaacagcagcgctgtcagtttactccag
gccatgtgcaaggagcctgaagctgtccacaccacgcctcagctcacaggtctagggctc
tgtaagtccattcagggtttgacactgggcccccatcaggaagagagtgggatatgtgac
agcggggtggagacctctttctag
DBGET
integrated database retrieval system