Cyprinus carpio (common carp): 109109884
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Entry
109109884 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109109884
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109109884
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
APP1_cat
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109109884
NCBI-ProteinID:
XP_018978435
UniProt:
A0A9Q9ZM40
A0A8C1LSQ4
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Position
36:complement(1752864..1761059)
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AA seq
570 aa
AA seq
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MEGGEGRRAGGERSGRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERASAGAERMDRA
DGESSEEGDMDNPPPIFHELERLPPEEATRQRAEVDQLLQEDPWHMAKMIKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAGLYSWYVKKKAEINQQFTNASRGVVSGEE
SGDDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSAPSTGQTLPSSPSPVLKYSQ
PVLKYNQPVVCESLGTVRCSSGEDRCGGGRLASPVQLEPSHTLLDTHHHKPASGGGSLPP
VSTLTSLHGMSGPSGTPSGLIMASLPSVMSLGDSSLFIGLTSSQTQTVPVINNIGGGFTT
LQPISFQQQLHTSPQQPITQQLQSHICPSSFMATMAQLPCHMYSKADLSSYSSSLLSQAM
LITDSNSIGTLTNLTAVRQILTSDPEGHSNTPIEEESLHLQSTSPEPVSSGSLELYPQTH
TSETHPSHLLSSSPGDIDPYMPTQMVSTAQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagagggaagaagagcaggaggagaacgaagcggccggctgtcggcctta
caggagcagctggtgtggtctctactgggatcagggctgtcaaaagagctgctgatccag
gccatgggagatctggagcgagaacgggcctcggccggtgcagagaggatggatcgggct
gatggcgagagctcggaggagggagacatggacaatccacctcctatcttccatgagctg
gagaggctaccgccagaggaggccacgaggcagagagctgaagtagaccagctgttgcaa
gaggatccttggcacatggctaaaatgataaaaagctatatgcagcagcacaacctacca
cagagagaggtagtggagtccaccggcctcaaccaatcccatctctcccagcacctcaac
aagggcacaccgatgaagaatcaaaagcgagctggtctgtacagctggtatgtcaagaaa
aaggcagagatcaaccagcaattcaccaatgccagtcgaggtgttgtgtcaggagaggaa
tccggggatgatgtaagaaagggacggaggaatcgattcaaatggggcccagcatcccaa
caaatcctgtttcaggcctatgaacgacagaaaaaccccagtaaggaggagagggaggga
ctggtggaggagtgcaacagagcagagtgtcttcagaggggagtttctccatctcagctg
gctggcctaggctctaatttggtcacagaggtccgtgtatacaattggtttgcaaatcgg
cgtaaagaggaggcatttcgccacaaactggcactggacgtgccctatagcagccaatca
gctccctccacaggccagacactaccatccagtccttcaccagttctgaagtacagccag
ccagttctgaagtacaaccagccagtggtttgtgagagtctgggcacagtgagatgctcc
agtggtgaagaccgatgtggcggcggtcgtctagccagtcctgttcaactagaacccagt
catacactgctggatacacaccatcacaaaccagcatctggtggtggctccttacctcca
gtcagtactctcacttccctgcatggaatgtcaggaccctctggtaccccttcaggactg
atcatggcctccctaccaagtgttatgagtctgggggactcttcacttttcataggcttg
acgtcctctcaaacacagacggtccctgtcatcaataacatagggggaggctttactacc
cttcagccaatctcgtttcagcagcagcttcacacctcacctcagcagccaataacgcag
cagcttcagagccacatttgcccaagctccttcatggcaacaatggcacagttgccatgc
cacatgtacagcaaggcagacctgagctcttactcctccagtctcctgtcccaggccatg
ctcatcacagacagcaacagcattgggaccctgactaacctcacagctgttcgacagatt
ctcacctcagatcctgagggtcactcaaacactcccattgaagaggagtctttacatctg
cagtccacttcacctgagccagtgtcttcaggcagtttggagctctatcctcagacacac
acaagtgaaacccatccttcacacctgctctcctcttcacccggagatatagacccttac
atgcctacacagatggtctctactgcacaatag
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