Cyprinus carpio (common carp): 109110583
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Entry
109110583 CDS
T05134
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
ccar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109110583
03460 Fanconi anemia pathway
109110583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109110583
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109110583
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109110583
FA (Fanconi anemia) pathway
Downstream FA components
109110583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
109110583
NCBI-ProteinID:
XP_018979136
LinkDB
All DBs
Position
36:complement(12226251..12247743)
Genome browser
AA seq
917 aa
AA seq
DB search
MGRWVQESCNSLEEREYESSCKVWTGAEILGIFHGLGITADTFSLLQKNLAAVLEKEERI
GLVNGREDVVQVPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQSFMWTTQQDL
PDAQGFFARPQRRRQSTRTKTLVHTLSFWCLNPAVGISDLSDSVRSIVLTSGTLSPMGSF
SSELGIKFSIQLEANHVISKSQVWVGTIGAGPQGRKLCATFQHAEICFLPSYKMLDKLRD
RWINTGLWDKLEEQKTVITEPRGGGKGDFDELLQTYYEAIRGTAANSENRDGALLVAVCR
GKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRGLLPGGRWYEIQAY
RALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLVRHHDTFTGAMQSLE
SFSQCQRGAVETFEERPSQAAPQYPSPSTSTSPSPEIITPHKPSDSQLARPNLHTEMQSA
NSESRSSESGDQKNIQHPSEPSRERNVQRTPWSTSHLFTSTPVSSQFKTPIFQSELDVNS
VNNKQIQKEVIPVLPVAPKHQINGASDLKDSSVEPQLEQLFVIPTSTLRQNTSGMDHEDT
EEDEQSIFYSPELFEGDEEEKDEPTEVKKSPPDISHPLANSSASVLLEDLFGSEQGKRTL
SEDLVSSGIPDNTLLQGSTEQTDLNHGTAFENVPGSQNSISSSRLRRLSRCRQKRPSTSA
TSAGQRSDGRIRESVPVKSQAQNPKKSSSRPPTALRLELNQKMRGHILNRKGRQQTQRGN
QQKMGEAEVSGLENQHSHNQYSYSRRNAVVVPMQDTKQRDSVRHPAQRPSGHDGSPKVSS
SEGLKRETRTSQTGTCITVELVHPTPVEVLNDSLETQTGIKVQRSYSRKNRLQKRLKMAS
EGRHSQAQSCYLVSLPF
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgggacggtgggtgcaggaaagctgcaatagcttggaggagcgtgaatatgagtcttcc
tgtaaggtctggacaggggccgagattcttggcatcttccatggccttggcatcactgca
gacaccttctctttgctacagaaaaacctggcagcagtgctggagaaggaggagcggatt
gggctagtgaacgggagagaagacgtggtgcaggttcccaccatcagctccaacactcag
tcaatgctcaaaagcctctttatggtgctggaatttcttttcagacaaaattgcaggttt
gcagatgattaccgtgtggccctccagcagagcttcatgtggaccacccagcaggacctg
cctgatgctcaaggcttttttgcacgaccccaacgtcgccgacagagcacccgcaccaaa
actctggtgcacaccctgagcttttggtgcctcaaccctgccgtaggcatttcagatctg
agcgactcagtgcggagtatcgtgctgacctcgggcaccctctctcccatgggctccttt
tcctctgaactgggcatcaaattctccatccaactggaagcgaatcacgtcatcagcaag
tcacaggtctgggtcggtacaattggtgcagggcctcagggtcgtaaactttgcgccaca
tttcagcatgcagagatctgcttcctgccatcctacaagatgttagataaactgagggac
cgctggataaacacaggtctgtgggacaagcttgaggagcagaaaactgtgatcactgag
ccacgtggtggtggcaagggagattttgatgagttgctgcagacatactacgaggccatc
agaggaacagctgccaacagtgaaaacagagatggagcattgctggttgctgtttgcaga
gggaaggttagcgagggattagactttactgatgataatgccagagcagtggtcactatt
ggtatcccattccccaatatcaaagatttgcaggtcgaactgaagatgaagtacaatgac
aagcatgccaagtcacgagggcttctgcctggtggccgctggtacgagattcaagcatac
cgggcattaaaccaggcactcgggaggtgtatacggcatcgaaatgactggggggcactc
atactggtagatgaccggtttaggacaaacccgaacaaatatatcacgggcctgtctaag
tgggtgcgtcagctagtgaggcaccatgacaccttcactggcgccatgcagtccctggag
tccttttctcaatgccagcggggggcagtagagacctttgaagagagaccatctcaggct
gcccctcaataccccagcccctccacttctacctcaccctctcctgagataatcaccccc
cacaagccatctgactctcaacttgcacggccaaacctacacaccgagatgcagtcggcc
aactctgagagcaggtcttctgaatcaggtgaccaaaagaatatacagcatccatctgaa
ccaagcagagaacgtaatgtccaaagaacgccatggtctacaagccacctcttcacctcc
actccagtcagtagtcaattcaagactcccatttttcaatctgagctggatgtgaattca
gtgaacaacaagcaaattcagaaggaagttattcctgtgcttcctgtggcaccaaagcac
caaataaatggtgcttctgacctaaaagacagttcagttgaacctcaacttgagcagctc
tttgtgatccctacctctactttgagacagaacaccagcggaatggaccatgaagatact
gaagaggatgaacaaagtatcttctacagccctgagctgtttgaaggagatgaggaggag
aaggatgagcctacggaggtgaagaaatctcctccagatatcagccatcctctcgctaat
agctcagccagtgttcttttggaggatctgtttggttcagagcaaggcaagagaacattg
tctgaagaccttgtgagcagcggcatcccagacaacacattgttacagggtagtacagag
cagacagatttaaaccatggtacagcctttgaaaacgtgcctggctcacaaaatagcatc
agcagtagtcgattacgtaggctttccagatgtagacagaaaaggcccagcacatcagca
acatcagcaggtcaaaggtcagatggaaggatcagggagtcagtgccagtgaagtcccaa
gctcaaaatcccaaaaaatctagttcgaggcctccaaccgcactcagactagaactaaac
cagaaaatgagaggccatatcctgaatagaaagggaagacagcagacacagagaggtaac
cagcagaaaatgggagaagctgaggtttctggactggaaaaccaacacagccacaaccaa
tacagctattctagaagaaatgcagttgtagtgccaatgcaggataccaaacaaagagat
tcggtcagacacccagcccagagaccctcagggcatgatgggtcaccaaaggtctcatca
tcagagggattaaaaagggagacaagaactagtcaaactggcacttgtataacagttgaa
cttgtgcatcctacacctgtagaggtactgaatgacagcttagagacccaaacaggtatc
aaagttcagagatcgtattctaggaagaacaggctccaaaagaggcttaaaatggcatct
gaaggcagacattcccaagcacagagctgttatctagtcagtcttcctttttga
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