Ceratitis capitata (Mediterranean fruit fly): 101448759
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Entry
101448759 CDS
T07533
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03020
RNA polymerase
ccat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101448759
09124 Replication and repair
03420 Nucleotide excision repair
101448759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101448759
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101448759
Enzymes [BR:
ccat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101448759
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101448759
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101448759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101448759
NCBI-ProteinID:
XP_012160455
LinkDB
All DBs
Position
Unknown
AA seq
1935 aa
AA seq
DB search
MGDACVTRKVKGIQFGVLSPDEIKRLSVTEGGITRAVIVEDGKPALGGLMDPRQGVLNRE
SRCLTCAGNIVDCPGHFGHIDLSLPVFHIGFLIKTIKILRCVCFSCSKLLVSPTNPKVRE
LLNRTKTRPRMRLCLMRELCKSKTICEGGENMDIPIKCNNDKNISDHGGCGYHQPRITRN
KLELHATWQRLTEQRQERQIILTAHRVLEIFRNISDEDCVHLGMDPQHCRPDWMIISVLP
VPPLSVRPSVLMFGNSRSHDDITHKLADIIEANNELKKCIEKGAAEHIIRECSSLLQFHV
VTLIDNEMPGLPRALQKSGRPLKSIKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLN
IDQVGVPRSVAQNLTYPEVVTPFNIEFMQTLVHRGNNQFPGAKYIIRNNGDRIDLRFHPK
PSDLHLELGYKVERHLRDNDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNA
DFDGDEMNLHVPQSMETRAEIENLHLTPRQIVTPQTNKPVMGIVQDCLTGVCKMTKRDVF
ITHEQLMNLLMHMPCWDGVMPKPCILKPTLLWSGKQLFSLIIPGNLNMIRTHSTHPDEED
DSQYRWISPGDTKVVVEYSELIMGILCKRTLGAAAGSLLHIAYIELGHQISGEFYANIQK
VVNAWLLIEGHSIGIGDTIADPATYKEIQNAIAKAKNDVMLVIQKAHHMQLEPTPGNTLR
QTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVIAGSKGSNINISQVIACVGQQNVE
GKRIPYGFRKRTMPHFIKDDYGPEARGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKT
AETGYIQRRLIKAMESVMVQYDGTVRNAEGQIVQLRYGEDGLCGESVEFQTLPTIQLSNK
AFEKQFKFDVTQTRNLRKYFNEETVRNITESPEIIPQLEAEWEQLCRDREALRQIFPTGE
SKVVLPCNLQRMIWNVQKVFHIDKRSTTTLNPLDVIKGVRELLKQCVIVAGSDHISQQAN
DNATFLFQCLVRSTLCSKVVAENHRLTSESFEMLLGEIATRFQLSQVCPGEMVGALSAQS
LGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKRPRSPSLTVFLTGNPARDVEKA
KDVLCRLEHTTLKNVTTNTAIYYDPDPMHTVVPEDQEFVNIYYEIPDFDPNEISPWLLRI
ELDRKHMTEKKLTMELIAERIAASFGDDLKCIFNDDNAQRLIMRIRIMNSTSSESKFQGA
DLAEEEASLTRLDDDMFLRCIESNMLSDMTLQGIESISKVYMHLPQVTNKKRIYITETGE
FKSVAEWLLETDGTALMRVLSERNVDQTRTFSNDICEMFTVLGIEAVRKSIEKEMNNVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAISRHGINRQQTGPLMRCSFEETVDVLMDAAAHGE
RDAMRGVSENIIMGQMPPIGTGCFDMVLDASKCKFAMEVDSMNNKNALFYGSIFTPHTLP
GSGRSGMIEFSPGISDGLTPQSARSACFSPSSNISSPTMNVDDFCSSPYSSPSAESLKSY
YGGSSHYSPMSPLYDPNAYTNVSNNSSGSNDLLSTVMQSPKYSPSSPEFSPHYHHYLQVH
SPQSPSNSSSTFYSPASPTMSCASVIGSKRYSPTSPRYSPQTNNYSPTSPSYSPTAISSK
RCSTFSPSSPTSNNESLYSPSSPLNTPENLETSSSITCRTLKRVQPKKYRATPYFFAENN
ATPSSSATYSPTSPIYAHYSPSSPNYVAQTPRYSPSTLSYNPSSPSYTPVSPSYMANSAQ
YSPLSPTINYSPTISSPQMHFIPPGSPPQYTAALQSPRYSAGSTIAYSPTSPTYSPNSNR
YSPASPQYSGSPLSPLSPTYSNTSQSNINYSPLSPSFYSSSPASPIYGRTDSPMSPISPS
SPNSPASPQYSPDSN
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgcttgtgttacacgaaaagttaaaggcatacaatttggtgtgctctcaccg
gacgaaatcaaacgcttatccgttacagaaggtggcatcacacgtgcagtaattgtggag
gatggtaagccagcgttgggcggtttaatggacccgcgtcaaggagttttaaatcgggaa
tcacgttgccttacatgcgccggcaatattgtcgactgtcccggtcattttgggcatatt
gatttgagtttgcctgtttttcatattggattcctaattaaaactattaaaattttacgt
tgcgtatgcttctcttgctctaagttattggtttcacccacaaatccgaaggttagagaa
ttactgaatcgcaccaaaacacgcccacgcatgcgtctatgtctcatgcgtgagctatgc
aaatcgaagacaatatgtgaaggtggcgaaaacatggacataccaattaaatgtaataat
gataagaatatttcggatcatggcggttgtggttatcatcaaccacgcattacacgaaac
aagctggaactacatgccacctggcagcgtttaacggaacagcgtcaagagcgtcaaatc
attttaactgcacatcgtgtcttagagatcttccgaaatatttccgacgaagattgtgta
catttaggaatggatccacaacactgccgtcccgattggatgatcatttcagtgctgcca
gtaccgccactatccgtgcgtccttctgtcctaatgtttggcaactcacgttctcatgat
gatatcacacacaaattggctgatatcatcgaagccaataatgaattgaagaaatgtatt
gaaaaaggcgctgccgaacacataatcagagagtgctcctcactgttgcagtttcatgtg
gttacgctcattgacaatgaaatgcctggtttgccgcgtgctctacaaaaatccggacgt
ccattaaaaagcatcaaggcgcgcctaaaaggcaaagaggggcgtatacggggaaattta
atgggcaaacgtgtagatttttctgcacgtaccgtcattacacccgatcccaatttaaat
atcgatcaagttggcgtgccacgatcggtagcgcagaatctaacttaccccgaagtagta
acaccattcaatattgaattcatgcaaacccttgtgcatcggggaaataatcaattccct
ggcgctaagtacataatacgtaacaatggagatcgtatcgacttgcgttttcatccaaaa
cccagtgacttacatttggagcttggctacaaggtagaacgtcatttgcgtgataatgac
cttgtaatttttaatcgccaaccaactctacacaaaatgtcaatgatgggtcatcgcgtc
aaagtcttaccgtggtccacatttcgtatgaatctatcttgcacttcgccttataatgct
gactttgatggcgatgaaatgaacttacacgtgccgcagagcatggaaactcgcgccgaa
attgaaaatcttcatctaacaccacgacaaatagtcacaccccaaacgaataaaccggta
atgggtattgtacaagactgtttgacgggtgtatgcaaaatgaccaaacgcgatgtcttc
ataacccatgaacagcttatgaatttactcatgcatatgccctgctgggatggtgtaatg
ccgaagccatgtatattgaaaccgacacttttatggtcgggcaaacagcttttctcttta
atcattccgggaaatttgaatatgatacgtacacactcaacacatcctgatgaagaggat
gatagtcaatatcgttggatttcgccgggtgataccaaggttgttgtcgaatacagtgaa
ctaattatgggtattctatgtaaacgcacattgggtgctgccgcaggatctctgttacac
attgcttacattgagctcggtcatcaaatttccggagaattttatgcaaatatacaaaaa
gtagtcaacgcatggctgctaatcgagggccacagtatcggtattggcgatactattgcc
gatccggccacatacaaagaaatacaaaatgctattgcgaaagcgaagaacgatgttatg
ttagtcatacaaaaggctcatcatatgcagctagagccaacgccgggcaatacgctacgc
cagacatttgagaatcaagtaaatcgtattttaaacgatgcacgcgataaaaccggtggc
tcggcaaagaaatcgctgacagaatataataacttgaaggccatggtaattgctggttcc
aaaggctccaacatcaacatatcacaagtgatcgcctgtgtaggtcagcagaatgttgaa
ggtaaacgtataccttatggttttcgtaagcgtacaatgccacatttcatcaaggatgat
tatgggccagaagcacgcggtttcgttgagaactcatatctggcaggcttaacgccaagt
gaattctactttcatgcaatgggtggacgcgagggactcatcgatacggctgtgaagact
gctgaaacgggatacatacaaaggcgtctaataaaagctatggaatcggttatggtgcaa
tatgatggcacagtacgaaatgctgaagggcaaattgtgcagttgcgctacggtgaagat
ggtctttgtggtgagtcggtagaatttcaaacactacccaccatacaactatcgaataag
gcattcgagaaacaatttaaatttgatgttacccaaacacgtaacctgcgcaaatatttc
aacgaggagaccgtacgtaatataacagaatcgcccgaaatcattccacagttggaggcc
gagtgggagcaattatgtcgcgatcgcgaagctttacgacaaatttttcctaccggcgag
tcgaaagttgttttaccatgtaatctacagcgaatgatatggaatgtacagaaagtcttt
catattgacaaacgctcaactacaactctcaatccattggatgtgattaaaggcgtacgc
gagctgctcaagcagtgcgtcattgtggctggttcagatcacatttcccagcaggccaat
gacaatgctaccttcctctttcagtgtctagtacgttcgacgctgtgctctaaagtggta
gctgaaaatcatcgtttgacgtccgaatcctttgaaatgttactgggcgaaatcgctaca
cgatttcaactctcacaagtttgtccgggcgaaatggtgggtgcactttcggcgcaatca
ctgggtgaaccagctacacaaatgacattgaacacatttcattttgctggtgtttcggca
aaaaatgttactctgggcgtaccacgtttgaaagagatcatcaacgtttctaagcgtcca
cgctcgccatctctaactgtgtttcttacgggcaatccagcacgcgacgttgagaaggca
aaagatgttctgtgtcgtctggaacacacaacactaaagaatgttacgaccaatacggct
atctactatgatccagatccgatgcatacagttgtacctgaagatcaagaattcgttaat
atttactatgaaatacccgattttgatccaaatgaaatttcaccctggctcttgcgcatc
gaactcgatcgcaagcatatgaccgagaagaagctcacaatggaactgattgccgaacgc
attgccgcatccttcggtgacgatctcaagtgcatttttaatgacgataatgcacagcgc
ctgataatgcgtatacgtataatgaactcaactagttccgaaagtaaatttcaaggcgcc
gatttggctgaggaggaagcatcgcttactcgtctagatgacgatatgttcttgcgctgc
attgagagcaacatgttgtccgacatgacattgcagggtatcgaatcgatttccaaggtg
tatatgcatttaccgcaggtaacaaataagaagcggatctacattaccgaaacgggtgag
ttcaaatcggtggctgagtggctgctggaaactgacggtacagcgttgatgcgagtgctg
agcgagcggaatgtcgatcaaacacgcaccttcagtaatgatatttgtgaaatgtttacc
gttttgggcatagaggctgttcgtaaatcgattgaaaaggaaatgaataacgtgctgcag
ttttatggcttatacgtgaactatcgccatttggcgctactctgtgacgttatgactgcc
aagggccacttgatggctatctcacgtcatggtatcaatcgccagcaaacgggtccctta
atgcgttgctctttcgaggaaacagttgatgtgttaatggatgcagcagcgcatggtgaa
cgggatgccatgcgtggcgtctccgaaaacattataatgggccaaatgccacctattggc
accggttgtttcgacatggtacttgacgcttccaaatgcaaattcgctatggaagtggat
tctatgaataacaagaatgctttattttacggttctatttttacgccacatactttacca
ggcagcggacgtagtggcatgatcgagttttcgcctggtataagcgatggtttaacacca
caatcggcacgttcagcctgcttttcgccttcatcgaatataagttcacctactatgaac
gtggatgatttttgtagttcaccatattcttcgccatcggccgaatcgcttaagtcatat
tatggtggttcctcacactactcacccatgtcaccgctatatgatccaaatgcatacaca
aatgtatcgaataactcatcaggtagcaatgatttgctttctacggtgatgcaatcgcca
aaatattcaccaagctcaccagaattctcaccgcattatcaccattatcttcaagtgcat
tcgccacagtcgccatcgaatagtagctcaacgttttattcaccagccagtccaacaatg
tcatgcgccagcgttataggttccaagcgctattcgccgacttcaccccgttattcacca
caaacaaataactactcaccgacgtcaccatcctattcaccaactgctatcagttcaaag
agatgcagcactttttctcccagctcaccaacaagtaataatgaatcgctatattcaccg
tcttcaccgctcaatacaccagaaaatttagagacatcttcttcaataacttgtagaact
ttgaagcgtgtacaacccaaaaaatatcgtgctacaccgtatttctttgccgaaaataat
gccacaccttcaagctctgccacatactcaccgacaagtcctatatatgcacactactct
ccgtcaagtccaaattatgttgcacaaacaccacgttattcgccatcaacgcttagctat
aatccttctagtcccagttatacgcctgtaagcccatcttatatggctaattcagcacag
tattcgccattgagcccaactattaactactctccaacaatatcttcaccacaaatgcat
ttcataccaccaggctcgccacctcaatatacagcagcgttacaaagtccacgatactca
gccggttccacgatagcttattcacctacatcaccaacatattcacccaattcaaatcgt
tactcaccagctagtccacaatattcgggcagccctcttagccctcttagccccacttat
tccaacacatcccaatcaaatatcaattactcacctcttagtcctagtttttattcatcc
tctcctgcaagtcccatatatggtcgcacagattcgccaatgtcgcccatcagtccaagc
agccccaatagtcctgcaagtccacaatactcgccagattccaattga
DBGET
integrated database retrieval system
