Cynara cardunculus var. scolymus (artichoke): 112510468
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Entry
112510468 CDS
T05604
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00052
Galactose metabolism
ccav00511
Other glycan degradation
ccav00531
Glycosaminoglycan degradation
ccav00600
Sphingolipid metabolism
ccav00604
Glycosphingolipid biosynthesis - ganglio series
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112510468
09103 Lipid metabolism
00600 Sphingolipid metabolism
112510468
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112510468
00604 Glycosphingolipid biosynthesis - ganglio series
112510468
00511 Other glycan degradation
112510468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112510468
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112510468
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112510468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
112510468
NCBI-ProteinID:
XP_024971657
LinkDB
All DBs
Position
LG 3:complement(39231018..39245544)
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AA seq
694 aa
AA seq
DB search
MAKRRSLKTTTIITLLLCLVAFSTVFAPLPSPPYNSLKQRKHHHHHSHRQVVSARKFEIA
DDMFWKDGEPFRIIGGDLHYFRTLPEYWEDRLLRAKALGLNAIQTYVPWNLHEPKEGQLD
FDGIADIVSFLELCQKLDLLVMLRPGPYICAEWDFGGFPAWLLTKEPAIRLRSSDPAYLA
LVDSWWGILLPKVAHLLYHKGGPIIMVQIENEFGSYGVDKDYLHHLVDLARSHLGDDLIL
YTTDGGTRDTLTKGTIRGDAVFSAVDFSTGENPWPIFKLQKEFNAPGKSPPLSAEFYTGW
LTHWGENIAKTDATSTASALENILSRNGSAVLYMAHGGTNFGFYNGANAAQESDYNADLT
SYDYDAPISESGDVDGAKFKALRGVIAKYSSGSLPPVPLNKKKTGYGRIRLEKTASLFDA
LDSNTHIKAIESENPISMEAAGQMFGFLLYASEYVTEGNGSSLFIPKVHDRAQVFVTCIS
EDQREQPHYVGTIDRWSNKHVNLPNAECASRSRLLILVENMGRVNYGQYLFDSKGILSTV
YLDGKPLLKWRMLPIPLNNLNEAQKINPVFDRAYPNFDGVSTRKSLKSSLGVHSKEPAFY
SGSFVVKEVMDTYMSFNGWGKGVAFVNGFNIGRFWPSFGPQCNLYVPAPILRRGKNILVI
LELESPEVELVVNSVDQPDFTCSSKHFEGRSAIN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacggcgaagcctgaagacgacgacgatcattactcttctcctatgtctagtt
gctttctctactgtttttgcgcctcttccttcgcctccctataattccctcaaacaacgc
aaacatcatcaccatcattctcatcgtcaagttgttagtgctcggaagtttgaaattgct
gatgatatgttctggaaagatggagaaccttttcgaatcatcggcggagacttgcattat
tttcgtactctgcctgagtattgggaagacaggctattaagagcaaaggctttgggcttg
aatgcaattcaaacttatgttccatggaatctgcatgaaccaaaagagggtcaactagat
tttgatggtattgcggatatagtttcatttcttgagctgtgtcagaagctagatttgctg
gtcatgctaaggcctgggccttacatatgtgcagaatgggattttggtggttttcctgct
tggttacttactaaagaaccagctatcagactgagatcatcagacccagcgtaccttgct
ttggttgatagctggtgggggatactgcttcctaaagttgctcatcttctttaccacaaa
ggagggcctataattatggttcagattgagaatgaatttggttcatatggagttgacaaa
gactatctgcatcatttggtggacttagcacggtcacatctaggcgatgatctaatttta
tatactacagatggaggcactagagacactctcaccaaaggaacaatacgtggagatgcc
gtcttttcagctgttgatttttcaactggagagaatccttggccaatatttaagttgcaa
aaggaatttaatgcaccaggaaaatcaccacccctttccgcagaattttacaccggttgg
cttacccattggggagagaatattgctaagacggatgcaacttctacagcatctgctctg
gaaaatattctgtcgaggaatggctctgctgtgctttatatggctcatggtggaaccaac
tttggattttataatggtgcaaatgctgctcaggaatccgactacaatgctgatcttaca
tcctatgattatgatgctcctattagtgagtctggcgatgtggatggtgcaaagttcaaa
gcattgcggggggttatagccaagtacagttcaggttctctccctccagttcctttgaat
aagaaaaagacaggatatggtcgtattcgattagaaaaaacagcatctttatttgatgca
ctggacagtaacacacacatcaaagctatcgaatctgagaacccaatttcaatggaggct
gcaggccagatgtttggattcttattatatgcctctgaatacgtaacggagggtaatggg
agcagtttgtttataccaaaggtgcatgaccgagcgcaagtgtttgttacatgcatctct
gaagatcaaagagaacaaccacattatgttggcacaatcgatagatggtcaaataaacat
gttaatcttcctaacgctgaatgtgcttccagaagtagattgttaattctggttgaaaac
atgggtcgtgtgaattacgggcagtacttgtttgatagcaaaggcatcctgtctactgtt
tacttagatgggaaacctctgctcaagtggagaatgctaccaattcctcttaacaatttg
aatgaagcccagaagatcaatcctgttttcgacagggcatatccaaatttcgatggagtt
tctacccgtaaaagcctgaaaagcagcctgggggtgcattcaaaagaaccagctttctat
tctggtagttttgttgtcaaggaagtaatggacacatacatgtctttcaatggctggggt
aaaggggtagcatttgtcaatggcttcaatatcgggagattctggccgtcttttggaccc
cagtgtaacctctatgtccctgctccgattctccggcgtggaaagaacatcttggtgata
ctcgagttagaaagtccggaagttgagctagtggtaaactcagttgaccagccagacttc
acttgcagttccaaacattttgagggcaggtcagctataaattaa
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