Cynara cardunculus var. scolymus (artichoke): 112511444
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Entry
112511444 CDS
T05604
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112511444
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccav01001
]
112511444
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112511444
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112511444
Protein kinases [BR:
ccav01001
]
Serine/threonine kinases: Other
RIO family [OT]
112511444
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Kinases
112511444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
TCAD9
CDC45
Motif
Other DBs
NCBI-GeneID:
112511444
NCBI-ProteinID:
XP_024972830
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All DBs
Position
LG 4:complement(17417629..17425759)
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AA seq
551 aa
AA seq
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MSIVVEKSDMEESKNEIGDQEEVLEDEEDISWSSDSEIGEALDYLDSKDDTGAVDGALIL
NARRPNAHGGIRSRPNASPLQPLSNRNQKFTNHIRASPLEEWEGRWNAGMSNSVTTAIRE
SVRGMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGIFHDINGCISTGKEANVYHA
TRSDGQELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRL
KTAGIRCPTPILLRLHVLVMEFIGKTGWAAPRLKDAALSLDKLREGYVEMITIMRVLYQK
CKLVHGDLSEYNILYHEGHMYVIDVSQSVDLDHPHALDFLREDCVHVSDFFKKRGVAVMT
IRELFDFIVDPAINDDSVDAYLEEAQQKILARGDEISVEDEIADAVFVQSFIPKTLDNVK
NAEEDVIRLTSGQDTGDMYYQTITGLKHALSIEQQQHHEANLQQDSPADPKEPSDLQDHE
SETETDEENSEDSEDDTSSSDDGKPTPLEKKAARKENKKKVKEEKREARKTKVPKALKKK
KKKLAKAKKYR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgttgttgaaaagtctgacatggaagaatcaaagaacgaaatcggtgatcaa
gaagaagtattggaagatgaagaagacatttcatggtcatcggattctgaaattggagaa
gctttggattatttggattccaaagacgatacaggagcagttgatggagctcttatactg
aacgcaagacggccaaatgctcatggaggaatccgttctcgtcctaatgcgtctcctctt
caaccgctctcgaatcggaaccagaaatttactaatcatattagagcgtcgcctttagag
gagtgggaaggaaggtggaatgctggcatgtcaaactccgtcaccactgcaatccgtgaa
agcgtgcgtgggatggctattggcaagactaaaactactgaaaaagctgaccgagcaact
gttgaacaggcaattgaccctagaactcggatggtgttattcaaaatgttgaatcgaggt
attttccatgatatcaatggctgcatttcaactggaaaggaggcaaatgtttatcacgct
acgagatctgatggtcaagaacttgcgatcaaagtgtacaaaacttctgttcttgtgttc
aaggatagggatcgctatgtacaaggtgattatcgcttcagatatggatattgcaagcac
aacccgaggaaaatggttaagacatgggctgagaaggagatgaggaatcttatgcgactg
aagacagctggaattcgttgtcccactccaattcttttgaggctccatgtcttggttatg
gagttcataggcaagacaggatgggctgcacctcgacttaaagatgctgcactgtctctt
gataagttacgggaaggttatgttgagatgataactataatgcgggtactatatcaaaag
tgcaagctagtacacggagatcttagtgagtacaacatactttaccatgagggtcacatg
tacgtcattgatgtatcccaatctgttgatctggatcatcctcatgcacttgattttctg
agggaggattgtgttcacgtatcagatttcttcaagaaacgtggagtagctgtcatgaca
attcgtgagttgtttgattttattgttgatccggcgattaatgatgattctgtggacgct
tacttggaggaggctcaacaaaaaatattggcccgaggtgatgagatttctgtggaggat
gaaattgcagatgctgttttcgttcagtcgttcatcccaaagacgctggataacgtgaag
aatgccgaagaagacgtaatacgactaacgagtgggcaagacaccggagatatgtactat
cagactattacagggctcaagcacgctctttcgatcgaacagcaacaacatcatgaagcc
aatcttcaacaagactcccctgccgacccaaaagaaccttccgacttgcaggatcatgaa
tcagagaccgaaaccgatgaagaaaactccgaggattccgaagacgacacatcttcttcc
gatgatggaaaaccgacacctcttgagaaaaaggcagcgagaaaagagaacaagaagaaa
gtaaaagaagagaaaagagaagctcgaaaaactaaagtgccgaaagctttgaagaagaaa
aagaagaagctggcaaaggcaaagaaatatcgatag
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