Cynara cardunculus var. scolymus (artichoke): 112512142
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Entry
112512142 CDS
T05604
Name
(RefSeq) glutamine--tRNA ligase isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112512142
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112512142
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112512142
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
112512142
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class I (A)
112512142
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112512142
Prokaryotic type
Other AARSs
112512142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Stm1_N
Motif
Other DBs
NCBI-GeneID:
112512142
NCBI-ProteinID:
XP_024973761
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All DBs
Position
LG 5:complement(35533475..35543474)
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AA seq
786 aa
AA seq
DB search
MVEALDLFLKIGLDKRTAENTIANNKVTSNLVAVINEAAVTDGCERSTGNLLYTVATKFP
ANALVHRPKLLEYIVSSKIKAPAQVEAAFAFLTVTGSEDLDISKFEEACGVGVEVSVEDM
ERTVNEIFEERKSAILEQRYRTNVGDIFAQVRKKQPWADPKIVKQLIDSKLYALLGEKTA
ADNEKPVKKKKEKPVKVEDKSTTEEAPQSIPSEEELNPYLIFPAPEENYKVHTEVFFSDR
PVLRACNSKAILEKHLKITGGKVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGGCYLR
YDDTNPEAEKKEYIDHIEEIVGWMGWKPFKITYTSDYFQELHDLAVELIRRGHAYVDHQT
PDEIKEYREKKMNSPWRDRPISESLKLFDDMKRGMIEEGKATLRMKQDMQSDNFNMYDLI
AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLDALSL
YQPYVWEYSRLNITNTVMSKRKLNRLVTENYVDGWDDPRLMTLSGLRRRGVTSTAINTFV
RGIGITRSDGSMIRLERLEYHVREELNKTASRAMVVLNPLKVVITNLEANSVIDLDAKKW
PDAPGDDPSSYYKVPFSSVVYIEQSDFRIKDSKDYYGLAPGKTVLLRYAFPIKCTEVVLS
EDKKTVVEVHAEYDPFKKTKPKGVLHWVAEPSPGIDPLKVEVRLFEKLFLSENPGELDNW
LDDLNPESKVVMTCAYAVPTLRDAAVDDKFQFERLGYFVADKDSTPEKLIFNRTVTLRDS
YGKAWK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcccttgacctctttctgaagatcgggttagataagcgaactgctgaaaac
accatcgccaacaataaagtcacctccaaccttgttgccgtgattaacgaggcagctgtc
accgatggatgtgaaaggtctacaggaaatcttctttatacggttgctacgaaattccct
gccaatgcccttgtgcatcgtcccaagttgctggaatacattgtttcttctaagataaag
gctccggcccaggtagaagccgcgtttgcatttcttactgtcactggttcagaggatctt
gatattagtaaatttgaagaagcatgcggagttggggttgaggtatccgttgaagatatg
gagcgcactgttaatgaaatatttgaagagagaaagagtgcaatattggagcaacgctac
cgaacaaatgttggtgatatatttgctcaagtgcgaaagaagcagccttgggccgatcca
aagattgtcaagcaacttatagattcaaagctttatgctttacttggtgaaaagactgca
gcagataacgagaagcctgtaaaaaagaagaaagagaaacctgttaaagtagaggataaa
agtaccacggaagaagctcctcaatcgataccctctgaagaagaactcaatccttattta
atattccctgcgccggaggagaattataaggtgcatacagaagtattttttagtgataga
cctgtgctcagagcttgcaattccaaagcaatattagaaaaacatctaaagataaccgga
ggaaaagttcttacccgttttccaccagaaccaaatggatacctgcatataggtcatgca
aaggccatgtttgttgactttggccttgcaaaagaaagaggtggtggctgctacctgaga
tatgatgatactaatcccgaagctgagaaaaaagaatatattgatcatattgaagaaata
gtgggctggatggggtggaaaccttttaagatcacttacaccagtgattattttcaagaa
ctacatgatttagcagtagagctcatacggaggggtcatgcttacgttgatcaccagacg
cccgatgagataaaagagtacagagagaagaagatgaacagtccttggagggataggccc
atctcggaatcacttaaactctttgatgatatgaagcgaggcatgattgaagaaggaaaa
gcgacccttagaatgaaacaggacatgcagagtgacaattttaatatgtatgacctcatt
gcatatcggatcaagttcactccacacccacatgctggagacaagtggtgtatctatcca
agttatgattatgcacattgcattgtcgattctcttgaaaatatcacacattcgctctgc
acacttgaatttgagacacggcgtgcttcatactactggttgctggatgcactgagcctt
taccagccttacgtgtgggaatattcacgcctgaatataaccaacaccgtgatgtcaaaa
cgtaagttgaaccgccttgtcactgagaattacgtcgatggatgggatgatcctcgtctg
atgacgctatctggattgcgacgtaggggtgtcacttctacggcaataaatacttttgtt
agaggaattgggattactagaagtgatggtagtatgatacgactggaacgtcttgagtat
cacgtacgtgaagaactaaataaaacagcatcccgtgctatggttgtactaaatccacta
aaggttgttattactaatcttgaggccaattcggtaatagaccttgatgcaaagaaatgg
ccggatgctcctggtgatgatccatcttcttattacaaggtccctttttcgagcgttgtc
tatatcgagcaatctgactttcgaatcaaagattcaaaagattattatgggcttgctcct
ggaaagactgtcctactcagatatgcatttcctatcaagtgtactgaagtggtgctttct
gaagacaaaaagactgttgttgaggtacatgcagagtatgatcctttcaagaagacaaaa
ccaaagggggttcttcattgggttgcagagccttctcccgggattgatccactgaaggtg
gaagtcagactgttcgagaaactgtttctttctgagaatcctggcgaacttgataactgg
cttgatgatttgaaccccgagtctaaagtggtaatgacatgtgcatatgctgtaccaacc
ctacgagatgcagcggtagatgacaaatttcagtttgaaaggcttggttattttgttgcg
gataaggattcaacacctgaaaagctcatcttcaaccggaccgttacattgcgagacagt
tatggcaaagcctggaaatag
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