Cynara cardunculus var. scolymus (artichoke): 112519595
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Entry
112519595 CDS
T05604
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112519595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112519595
04147 Exosome [BR:
ccav04147
]
112519595
04090 CD molecules [BR:
ccav04090
]
112519595
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112519595
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112519595
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112519595
CD molecules [BR:
ccav04090
]
Proteins
112519595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
AAA_16
AAA_22
AAA_15
RsgA_GTPase
nSTAND1
DUF87
Glyco_transf_22
DUF4044
Motif
Other DBs
NCBI-GeneID:
112519595
NCBI-ProteinID:
XP_024983569
LinkDB
All DBs
Position
LG 1:complement(12782858..12791324)
Genome browser
AA seq
1249 aa
AA seq
DB search
MTETAKGMPAQAEKKKEQSLPFYQLFLFADKFDYLLMILGSIGAIIHGSSMPFFFLLFGQ
MVNGFGKNQSDLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALRKRYL
EAVLKQDVGFYDTDARTGDIVFGVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSA
WKLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEEAIAQVRTVYSYVGET
KALNSYSDAIQHTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGRA
FTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLLEIIKQKPTIVQNSADGKCLTEVNGN
IEFKEVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQGQI
LLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMAQVEAATSVANAHS
FITLLPSGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDSGSESIVQE
ALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVEMGTHEELISKCGAYASLIRFQEM
AGNRDFSNPSTHRTRSTRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDR
KNPAPSGYFFRLLKMNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYTNPARME
SKIKECVFIYVGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEDH
NSSLVAARLATDAADVKSALAERISVILQNMTSLLTSFVVAFIVEWRVSLLILGTFPLLV
LAHFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTIAAFNAQDKILSLFSDELRVPQK
QSLRRSQFSGILFGISQLALFASEALILWYGAHLVSQGVSTFSKVIKVFVVLVITANSVA
ETVSLAPEIIRGGEAIGSVFSVLDRSTRIDPDDPDAETVETVRGEIELRHVDFSYPSRPD
VIVFKDLSLRIRAGQSQALVGASGCGKSSIIALIERFYDPTAGKVMIDGKDIRRLNLRSL
RAKIGLVQQEPALFAANIMENIGYGKDGATEAEIIEAARAANVHAFVSGLPQGYKTAVGE
RGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVA
HRLSTIRGVDNIGVVQDGRIVEQGSHGELVSRGGDGAYCRLLQLQQHRI
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacggcgaagggaatgccggcacaggcggagaagaagaaagagcagagtctg
ccgttctatcagttgtttttatttgcagataagtttgactaccttcttatgatcttaggt
agcattggtgccatcattcacggatcttctatgcctttcttcttcctgttattcggtcaa
atggttaatggattcggcaaaaaccaatcggatttgagtacgatgactcatgaagtctct
aagtatgctttgtatttcgtctatcttggactggtcgtttgcgtatcatcatatgcagag
attgggtgttggatgtacactggagaaaggcaagtgagcgcgttgagaaagaggtatttg
gaagcagttctgaaacaggacgtcggattttacgatacagatgcgagaacaggggatatc
gtttttggtgtttcaaccgacactctccttgtccaagatgccataagcgagaaggtggga
aactttatccattatctttcgacatttttggctggattggtggttggtttcgtctcagcg
tggaagctagctttgctgagtattgcagttattccaggaattgcatttgccgggggctta
tatgcatatactctcacaggtctcacttccaaaagccgtgaatcctatgccaatgctgga
atcatcgccgaggaggctattgcacaagttaggacagtgtactcgtatgttggcgagaca
aaggccctcaattcatattccgatgcaatacagcacaccctcaagcttggttacaaggcc
ggaatggcaaagggattggggctaggatgtacctatggaatagcttgcatgtcctgggca
cttgttttctggtatgcaggtgtgtttattaggaatggacagaccgatggtggaagagca
tttacggccattttctctgccattgttggcggcatgagtttaggccagtcattttcaaat
cttggagcatttagcaaaggcaaagcagctggatacaagttgctagaaattataaagcaa
aaacccactatagttcagaactctgcagatgggaagtgtttaactgaggtcaatggaaat
attgagttcaaggaagtaaccttcagttacccttcacgaccagatgtcattatctttaga
gatttctctattttcttcccggccggaaagacagttgcagtagttggtggtagtggatct
gggaaaagcactgttgtttccttaatagaaaggttttatgaccctaatcaaggtcaaata
ctgctagataatgtggacataaagacactgcagcttcgatggttgcgtgatcagattggt
cttgtgaatcaagaacctgcactcttcgccaccactatacttgaaaacatactttacgga
aaacctgatgcaactatggctcaagtggaagctgctacatctgtagccaatgctcatagc
ttcattaccttgcttcctagtggctataacactcaggttggggaaagaggagtccagctc
tctggtggtcagaaacagagaattgcaatagctagagcaatgttgaagaacccaaagatc
ttgctccttgatgaggcaaccagtgcccttgattcgggttctgagagcattgtgcaagaa
gctcttgaccgtctaatggtcggaaggacgactgttgttgtcgcacatcgtctctctacc
ataagaaatgttgattcaatagcagtcattcaacaaggacaagttgtcgagatgggaacc
catgaagaactaatttcaaaatgcggggcctatgcttccttaattaggtttcaagaaatg
gcgggaaacagagatttctcaaatccttcgacccatcgcacacgttcaacacgacttagt
cattcattatcaacaaagtctctcagcctcaggtccggaagcttaagaaatctaagctat
caatacagcactggtgcagatggtcgtatcgaaatgatctccaatgcagaaacagatagg
aagaatccagcaccaagtggatactttttccgccttctgaagatgaatgctccagaatgg
ccttattctataatgggtgctgtaggatcgattctttctggatttatcggtccaacattc
gcaatcgtgatgagcaatatgattgaggtcttttactacactaaccctgctagaatggag
agtaagatcaaagagtgtgttttcatctacgttggagccggtctgtatgctgtagtagcg
tatcttatccagcattacttctttagcattatgggagagaatcttactacaagagtaaga
aggatgatgcttgcagcaatcttgaggaatgaagttggatggttcgatgaggaggatcat
aactctagtctagttgcagcccgactagcaacagatgctgcggatgtgaaatctgccctc
gccgagaggatctcggttatattgcagaacatgacatctctcctcacttcatttgtagtt
gcatttatagtggaatggagggtctcacttctcatcctcggcaccttccctcttcttgtc
ctggctcattttgctcagcaactttctctcaaaggttttgctggagacaccgcgaaggca
catgccaagactagcatgattgcaggggaaggagtgagcaacattcgaaccattgcagct
ttcaatgcccaagacaagatcctatcgttattctccgacgaacttcgtgtcccccaaaag
caaagccttcgccgcagtcagttttccggcatactttttggtatctcccaacttgctctc
tttgcttccgaagctctaatcctctggtacggggcccatctcgttagccaaggtgtctcc
accttctctaaagtcatcaaagtgtttgtggtcttggtcattaccgccaactctgtagct
gaaactgtcagccttgctcccgagattatcagaggtggtgaagccattgggtctgtgttt
tcggttctcgatagatcaactcgaattgacccagacgatcctgatgccgagacagtcgaa
acagttagaggcgagattgagctacgtcacgttgacttttcatacccttcaagacccgat
gtgatcgtattcaaggaccttagtcttagaatccgggcaggccagagccaagccctcgtg
ggcgccagtggttgtggcaaaagttccataatcgccttaatcgagcgattctacgacccg
actgctggaaaagtgatgatcgatgggaaagacatccgacggttaaatctaagatccctt
cgtgccaaaatcggattggtgcaacaagaacccgccctattcgcagctaacattatggag
aacatcggttacggaaaagatggagccaccgaggccgaaattatagaagcagcccgtgcc
gcaaatgttcatgcattcgttagcggtttgcctcaagggtataaaacagcagtaggcgag
agaggagttcaactatcgggaggccaaaaacaaaggattgcaatagccagggccgttctg
aaagacccagcaatattgctactagatgaggccaccagtgctctagatgcggaatctgaa
tgtgtgcttcaagaagcacttgaaaggctgatgagagggcgaacgacggttttggtggcc
caccggttatcgacgatccgaggtgtggataatattggggtggtccaagatggtcgaatc
gtggaacagggtagccatggggaattagttagccgaggaggcgatggggcatactgtagg
ttgttgcagctacagcaacatcgcatatga
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integrated database retrieval system
