Cynara cardunculus var. scolymus (artichoke): 112519946
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Entry
112519946 CDS
T05604
Name
(RefSeq) ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112519946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112519946
04147 Exosome [BR:
ccav04147
]
112519946
04090 CD molecules [BR:
ccav04090
]
112519946
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112519946
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112519946
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112519946
CD molecules [BR:
ccav04090
]
Proteins
112519946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
AAA_16
AAA_15
Zeta_toxin
AAA_21
SbcC_Walker_B
DLIC
AAA_23
Motif
Other DBs
NCBI-GeneID:
112519946
NCBI-ProteinID:
XP_024984031
LinkDB
All DBs
Position
LG 10:7657994..7671618
Genome browser
AA seq
1198 aa
AA seq
DB search
MLMMIGTLGAIGFGMAQPLMTVIFGQLINSLATSDSSNVTDNISKVCIVYLYLAIGIGIA
SFFQVSCWIISGERQSIRIRGLYLKALLGQDVEFFDTQTSTGEVIERMSSDPIIIREALG
EKVGKFIQLVTTFVGGFLVSFIRGWRLALVVCFSAPVLVVAGGCMSFIISEMAVRAQASY
AQAGNVVEQTVGAIRTVASFNGEKQAIKKYDDKLEIAYSATAHQGLASGLGTAVSLLVSS
CSHGLAIWYGSKLVLEKGYNGGEVISIIMAMMFGAFSLGQTSPCLSAFAQGRAAAYTMFE
TINRKPKIYAYDEDGIILEDIKGEIELKDVYFRYPARPHIQILSGFSLHIPSGMTAALVG
QSGNGKSTVISLLERFYDPETGEVLIDGVNLKKMQLKWIRSKMALVSQEPVLFTTTIREN
IMYGKENATDEEIEAAIHLARASDFINKLPRRLDTMVGERGTQLSGGQKQRIAIARAILK
NPRILLLDEATSALDAESERLVQNALDTVMASRTTVVIAHRLSTIRNAELIAVVHAGKLL
EKGNHEELIKVPAGAYAQLVQMQSGKNHQAEEEQQVVVDIELEDIEQSSCDGSSVKTSPA
NRERKEETTGPKRVKNIPIKRIAYLNKPELLVLFLGSIAAVAHGVLFPIHGLIMSSSIKI
FYEPPNKLRKGSSFWALMFVGLGFCSLLFVPLQNCFFGVAGGKLIQRIRSLSFRKIVHQE
MSWFDKPEHSSGAVGARLATDASTMRSILGDALALVVQNVAMIAAGLVIAFTANWILALV
ILVLLPLLSLQGYIQLKFYKSISAGAKAMYEDASQVASDAVGNIRTISSFGAEEKVINLY
QKKCEQPIKQAVKSGIVNGAGFGLSSFVLYSSTSIFFYIGSILQQHGRITFNEIFRVFFS
LSTLSSGLSQSATLFSDLNKAQESIISIFEILDSKPEIDSSIESGTTLDQVMGNVELQHV
SFKYPTRPYIQVFKDLSLTIPSGKTVALVGESGSGKSTIIGLLERFYNPCSGHIYLDGMD
IQKFKISWLRQQLGLVSQEPILFNETIRANIAYGKQGGATEEEIIKAAKASNSHNFISAL
PHGYDTTVGGRGEQMSGGQKQRIAIARAVLKDPKILLLDEATSALDAESEHIVQDALDTV
MIGRTTIVVAHKLSTIKGADIIAVMKNGVIAEKGRHDELLNLSGGVYATLAALQTTSI
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgatgatcgggacgctaggtgccattgggttcgggatggcgcaacctcttatg
actgttatatttggacaactaataaactcgttggcaacttccgacagctcaaatgttact
gataacatatcaaaggtgtgcatcgtttacttgtatttggctataggcatcggcattgcc
tctttttttcaggtatcttgttggatcatatcgggagaaagacaatcgatccgcataaga
ggactgtacttgaaggcactattgggacaagatgttgagttctttgatacccaaactagt
acaggtgaagtcatagaaagaatgtctagtgaccctattatcatcagagaagctcttggt
gaaaaggtaggaaagtttattcaacttgttacaacgtttgttggaggcttcctagtatca
tttattcgaggatggcggcttgcacttgtagtatgcttttctgcaccagtgctagttgtt
gctggagggtgcatgtcttttatcatctcggaaatggcggttcgtgcacaagcctcctat
gcacaagctggaaatgtggttgaacaaacagttggagccattagaactgttgcatccttc
aatggggagaagcaagcaataaaaaagtatgacgataagctagaaattgcttattctgca
actgctcatcaagggttggcgtcagggttaggaaccgctgtatctttactagtttcctct
tgtagccatgggctagctatttggtatggatccaaactggttttggagaaaggctacaat
ggcggagaagttattagcatcataatggccatgatgttcggggcattttcactaggccag
acttccccatgtctatctgcatttgcacaagggagagctgcagcttacactatgtttgag
actatcaaccgtaaaccaaaaatttatgcgtacgatgaagatggaatcatactggaagat
ataaaaggtgaaatcgagctcaaagatgtctactttaggtaccctgcgcgcccccatatc
cagatcttatcgggtttttctctgcacattccaagtggtatgactgcagccttagtaggt
caaagcggaaacgggaagtcaaccgtcataagtttgctggaacgattctatgatcctgaa
accggagaagtgcttatagatggtgttaacttgaaaaagatgcaactaaaatggataaga
tcaaaaatggcattagttagtcaggaacctgtgttgtttacaactaccataagggaaaac
ataatgtatggaaaggaaaatgctaccgatgaggagattgaagcggctatccaccttgcc
cgtgcttcggatttcatcaacaaactacctcgaaggcttgatacgatggtgggtgagcgt
gggactcagctatctggtggccaaaagcagagaatagcaatagcaagagctattctgaaa
aacccaagaatcctccttttagatgaagcaacaagtgcattggatgctgaatctgagcgt
ttagtacaaaatgcgctcgacacagtcatggcctctcggacgactgtggtcatcgcacat
cgtttgtctaccattcgaaatgctgagcttatagctgtggttcatgctggtaagctgctc
gaaaaaggtaatcatgaagagttgataaaagttcctgctggggcttatgctcagcttgtc
caaatgcaatcgggcaaaaatcatcaagcagaagaagaacaacaggttgtcgtagacata
gaactagaagatatcgaacaaagttcatgcgatggatcttcagttaaaacatctccagcc
aatcgagaacgtaaggaggagacgactggacctaagagagtaaaaaacattcctatcaaa
cggatagcgtatctaaacaagcctgaactgcttgttttgttccttggatctattgctgca
gttgcgcacggtgtgcttttccctatccatgggttgataatgtcatcctccataaagatc
ttttatgagcctccaaacaagcttcgtaaaggttcgagcttttgggcactgatgttcgtc
ggtctgggcttttgttccttgttatttgtgccgctgcagaactgtttttttggagttgcg
ggaggtaaactgattcaaagaatccgctcattgtcattccgaaagattgtccaccaggaa
atgagttggtttgacaaacccgaacattcaagcggtgcagttggtgcaaggctagcaaca
gatgcgtcaacgatgaggagtattcttggcgatgctttggcactagttgtacaaaatgta
gccatgattgcagctggcctcgtgatagctttcaccgctaactggattcttgcgcttgta
atactagttttgttgcctttgcttagcttgcaaggatatattcagctcaagttttacaaa
agcatcagtgccggtgccaaggcgatgtatgaagacgccagccaagttgcaagtgatgcc
gttggaaacattagaaccatttcctcctttggtgctgaagagaaggtgataaatctgtac
caaaagaaatgcgagcaaccaataaaacaagcagttaaaagcgggattgtaaatggtgcg
ggtttcgggctcagttctttcgtactctactcctcaacttcaatctttttctacattgga
tccattcttcagcaacatggaagaataacctttaatgaaattttcagggttttcttttct
ttgtcaacactatcatcgggtttatctcaatcagccacactgttttccgatttgaacaaa
gctcaggaatcaattatctccatttttgagattctcgacagtaagcccgagattgattcg
agcattgaaagtggcacaacattggatcaggtaatgggtaatgttgagcttcaacatgtg
agtttcaagtatccaacaaggccatatattcaagttttcaaggatttgtctttgacaata
ccatctggaaagactgtggctctcgttggagagagtggaagtgggaagtcgacaatcata
ggtctacttgaacgattctataacccatgctcgggccatatctacctggatggcatggac
atccaaaagtttaaaataagttggctaaggcaacaacttggtctagtaagccaagagcct
atactattcaatgagacgatccgagctaacatagcttacggaaagcaaggaggtgcaaca
gaggaagaaataatcaaagccgcaaaagcatcaaactcccacaattttatatcagcgttg
cctcatggttatgacaccactgtcgggggaagaggtgagcaaatgtctggtgggcaaaaa
caacgtatagcgattgcaagggcggtactgaaagacccgaaaatccttttgctagatgaa
gccacaagtgccttggatgcagaatcagagcacatagttcaagatgcattagatacagtg
atgattggaaggacaaccattgtggtagctcataaattatccaccattaaaggggctgat
ataattgcagttatgaagaatggtgtgattgctgagaagggcaggcatgatgagcttctg
aacctaagtggtggagtttatgcaactctagctgctcttcaaacaacttctatctaa
DBGET
integrated database retrieval system
