Cynara cardunculus var. scolymus (artichoke): 112521022
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Entry
112521022 CDS
T05604
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00906
Carotenoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112521022
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112521022
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
112521022
Prenyltransferases [BR:
ccav01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112521022
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GFIT
Motif
Pfam:
SQS_PSY
DUF4186
HTH_25
Motif
Other DBs
NCBI-GeneID:
112521022
NCBI-ProteinID:
XP_024985417
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Position
LG 11:1855121..1857255
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AA seq
376 aa
AA seq
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MSSAVSILAKPCTIGSVINNGRHSHQEFTITARVVAPKRPSLPELSIKGIPHTDLHVREI
VQRQLRTRSSDHAGCRKPEFHPVFLEDAYDRCRDICAEYAKTFYLGTRLMTEERQKAIWA
IYVWCRRTDELVDGPNAMHMSAAVLDRWEERLEDLFDGRPFDMLDAALTDTVHKFPLDIK
PFRDMIEGMRMDTRKNRYENFQELYLYCYYVAGTVGLMSVPVMGISPESSSSASSIYNSA
LNLGIGNQLTNILRDVGEDALRGRVYLPQDELSQFGLGDEDVYSRRVTDNWREFMKGQIR
RARFYFNQAEEGASKLDKDSRWPVWSSLLLYREILDAIEENDYDNLTKRAYIGRTKKLLM
LPLSYSRSVSTGFAFH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgcagtatccattttagctaagccttgtaccataggatcagtgatcaacaat
ggcagacactcacatcaagagttcacaataacagctagggttgtagcaccaaagagacca
tctttgcctgagttatcgataaaaggcattcctcacactgatctacatgttcgagagatc
gttcaaagacagttgcgaacacgaagcagtgatcatgctggttgcagaaagcccgagttc
catcctgtgtttcttgaagacgcttatgatcggtgcagagatatttgtgctgaatatgcc
aagactttctatctaggaaccaggctaatgactgaggaaagacagaaagcaatatgggcc
atatatgtttggtgcaggagaacagatgaactagttgatggacctaatgcaatgcacatg
agcgctgcggttctcgaccgatgggaagagaggctcgaagatctattcgatggccggccc
tttgacatgcttgatgctgcccttaccgacacagttcacaagtttccactagacattaag
cctttcagggacatgatcgaaggcatgagaatggatactagaaaaaaccgttacgaaaat
ttccaagaactttacctatattgctactatgttgctggaacagttggtctgatgagtgtt
cctgtgatgggtatctctccagaatcatcatcatctgcatcaagcatctataattccgct
ctcaatcttggcatcggaaatcagctcacgaacatacttagagatgtaggagaagatgca
ttaagaggccgagtttatcttcctcaagacgaactatcacaatttgggctaggtgatgaa
gatgtttactcaagaagggtgaccgataactggagagaattcatgaaagggcagattaga
agagctagattttacttcaaccaagccgaagaaggagcttctaagcttgacaaagatagt
cgttggccggtctggtcatcgttgttgttgtaccgcgagatcttggatgctattgaggag
aacgattatgataacttgacgaagagagcttacatcggtagaacaaagaaacttctcatg
ttacctttatcgtactctagatctgtatcgaccggttttgctttccattag
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