Cynara cardunculus var. scolymus (artichoke): 112522952
Help
Entry
112522952 CDS
T05604
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112522952
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112522952
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112522952
03036 Chromosome and associated proteins [BR:
ccav03036
]
112522952
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112522952
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112522952
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112522952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
CLASP_N
TAF6_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
112522952
NCBI-ProteinID:
XP_024988082
LinkDB
All DBs
Position
LG 12:3711794..3719468
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGLEHAHVLLPPLETLCTVEESCLRDKAVESLCRIGSQMRDS
DLVDWFIPLVKRLAACEWFTARVSACGLFHIAYPSASEMLKAELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVEPSHLKVDIMQIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGADWAMQHIVPQV
LEMVNNPHYLYRMTILSAISLLAPVMGSEITCSKLLPVVITLSKDRVANIRFNVAKVLQS
FITIVDQSVVEKSIRPCLVELAEDPDVDVRYFSKQALQAIDQVMMST
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggacgagcccttgtaccccatagcagtactgatagatgagctgaagaat
gacgatatccaattgcggttaaattctataagaaagctttctacaattgcccgtgcttta
ggcgaggagcgtacccggaaagagttaattcctttcttgagtgaaaacaatgatgacgac
gatgaggtccttcttgcgatggctgaagagctaggtgtgttcattccttatgttggaggg
ctggagcatgcccatgtgttactaccccctctagaaactctttgcactgttgaggaatca
tgtctgagggacaaagctgtggagtctctatgcaggatcgggtcacagatgagagactca
gatttggttgactggtttattcctcttgttaagaggctggcagcttgtgaatggttcact
gctcgggtttctgcctgtggattgtttcacattgcttatcctagtgcctcagagatgttg
aaggcagagttgaggtcaatatatagtcagttatgtcaagacgacatgcctatggttagg
agatccgccgctacaaacttggggaagtttgctgctaccgtagaaccatctcatctcaag
gttgatatcatgcaaatatttgaggatcttacacaggatgatcaagattctgttcgtttg
cttgctgtcgagggttgtgctgctcttggcaaattgttggaaccccaagactgtgttgca
catattcttcctgtcattgtcaacttttctcaggacaagtcatggcgcgttcgctatatg
gttgctaatcagctgtatgaactatgtgaagctgtgggacctgaacctaccaagacggac
ttggttccagcatatgtgaggctacttcgtgataacgaagctgaagtacgtattgcagct
gctggcaaggtcaccaagttctctcgcattctcagcccagaacttgcgattcagcatatt
cttccatgtgtgaaggagttgtcttcagattcttctcagcatgttaggtctgctctagcc
tctgttataatgggcatggctccagttttagggaaggatgcgactatagaacaacttctc
cctatatttctatcacttctgaaggacgagtttccagatgtacgcctgaatatcattagt
aagctagatcaagtaaatcaggtgatcggaatcgatcttttgtcccaatctttactaccg
gcaattgttgaacttgctgaggacaggcattggagggttcgattggctataattgaatat
atacctcttttggcaagtcagttaggtgtagggtttttcgatgataagcttggtgcccta
tgcatgcaatggttacaggacaaggtttactccattagagaggctgctgctaacaacctg
aagcgccttgcagaagaatttggtgctgattgggcgatgcagcacattgttccacaggtc
ttggaaatggtcaacaacccgcattacttgtatcgcatgaccattctcagtgcgatttct
ctacttgctcctgttatgggatcggaaattacttgttctaagttgctccctgtggtcatt
actctatccaaggacagagtggcgaatatcaggtttaatgtggcgaaggtgttgcaatct
tttattaccatcgttgatcaatccgtggtggagaaaagcattcggccatgcctggttgag
ctggcagaggatccagatgtggatgtccgttatttttcaaaacaagctcttcaggctatc
gatcaagtgatgatgtcgacctaa
DBGET
integrated database retrieval system
