Cynara cardunculus var. scolymus (artichoke): 112527173
Help
Entry
112527173 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112527173
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00240
Pyrimidine metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
112527173
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
112527173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
112527173
NCBI-ProteinID:
XP_024993405
LinkDB
All DBs
Position
LG 1:38814572..38828770
Genome browser
AA seq
352 aa
AA seq
DB search
MAHNAFSRLVNLHRHFNITKSGTKGGNENAAPGTIKISHDVSTALSNGKAVVALESTIIS
HGMPYPQNLETAKELEAILKENGAVPATIAILDGIPCIGLSAEELEMLAKLGPKARKISR
RDIAYVVTTRSSGGTTVSATMIFASMVGISVFVTGGIGGVHRHGETTLDISSDLTELGKT
PIAVVSAGVKSILDIPKTLEYMETQGVCVVSYKTDDFPAFFTEKSGCKAPCQLDSPEECA
RLIEVNRKLDLKSGILIAVPIPKEHSVSGNVIESAIQTALREAGDKGITGSAETPYLLSR
VNDLTGGASLESNIALVKNNAVLAAQIAVSLAKIEDHGHRKGSGSGAGAADS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggctcataacgccttttcaaggctggtcaacctccatcgtcatttcaacatcacaaaa
tcaggcaccaagggtggaaatgagaatgcggctccggggacaattaagatctctcatgat
gtttctacggctttatcaaatgggaaagcggttgttgctctggagtccactataatatct
catggcatgccctatcctcagaatttggagactgcaaaagagctggaggccattctgaag
gaaaatggagctgttcctgctactattgctattttagatggcattccatgcataggtctc
agtgctgaagaactggagatgttagctaagctaggacccaaggctcgaaagatatctcga
agggacattgcttatgttgtgactacaagaagtagcggtggaactaccgtgtctgcaacc
atgatctttgcttcaatggttggcatatctgtatttgtgaccgggggtattggaggagtc
cacagacatggagaaaccactctggatatatcatctgatcttactgagcttggaaagact
cctatagctgtagtatctgctggtgtgaagtccatattagatattcccaaaaccctagaa
tatatggaaactcaaggagtttgtgttgtttcttacaagactgatgactttcctgctttt
tttactgaaaaaagtggctgcaaggcaccatgccaactagattcaccggaagagtgtgct
cgactaattgaggtcaacaggaaactcgatcttaaatcgggcatactgatagcagttcct
atacccaaagaacattctgtttcgggtaacgttatagagtctgctatacaaacagcactc
agagaagctggtgataagggcattacgggcagtgctgaaactccttacttgctttctaga
gtgaacgacctgaccggaggagcttctctcgagtcaaacattgctcttgtgaagaacaat
gccgttcttgctgctcagattgctgtttcacttgctaagatcgaagatcatggccatcgt
aaaggatcgggatcaggagcaggagcagccgactcctga
DBGET
integrated database retrieval system
