Cynara cardunculus var. scolymus (artichoke): 112527427
Help
Entry
112527427 CDS
T05604
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112527427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112527427
04147 Exosome [BR:
ccav04147
]
112527427
04090 CD molecules [BR:
ccav04090
]
112527427
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112527427
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112527427
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112527427
CD molecules [BR:
ccav04090
]
Proteins
112527427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_29
AAA_16
AAA_22
AAA_21
RsgA_GTPase
AAA_30
nSTAND1
AAA_19
APS_kinase
Motif
Other DBs
NCBI-GeneID:
112527427
NCBI-ProteinID:
XP_024993859
LinkDB
All DBs
Position
LG 15:19679525..19686105
Genome browser
AA seq
1260 aa
AA seq
DB search
MSNTASASVSVDGGGGGGGDTKDDQKKPSQTPKPKKVSMLKLFAFADSYDYLLMFLGSVG
ACIHGASVPVFFIFFGKLINIIGLAYLFPKEASHKVAKYSLDFVYLSVVILFSSWIEVAC
WMHSGERQAAKMRMAYLRSMLSQDISLFDTEASTGEVISAITSDIIVVQDAISEKVGNFM
HYISRFLSGFIIGFVRVWQISLVTLSIVPAIAIAGGVYAYVATGLIVRVRKSYVKAGEIA
EEVIGNVRTVQAFSGEEKAVNSYIAALSNTYKYGKKAGLAKGLGLGTLHFVLFLSWSLLV
WYTSIVVHKNIANGGDSFTTMLNVVIAGLSLGQAAPDISAFIRAKAAAYPIFEMIERTTV
AKTSAKMGRTLAKVDGHIRFDDVQFSYPSRPDVMIFDKLRLDIPSGKIVALVGGSGSGKS
TVISLIERFYEPLSGQILLDGTNLRELDIKWLRHQIGLVNQEPALFATTIRENILYGKDS
ATYEEITHAAKLSEAITFINNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLL
DEATSALDTESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADTIAVVQHGKIVETGSHDE
LMSRPDSAYSSLVQLQETASLHRAPSRVPSMGRPSSLKFSRELSRTTTRSIGASFHSDRE
SVGKLGVEGVEYAKAPRVSSKRLYSMIRPDWAYGLTGTIGALIAGSLMPLFALGISQALV
AYYMDWETTQHEVRKIAVLFCLGAGVSITVYAITHLCFGIMAERLTLRVRQKMFSAILRN
EIGWFDDTNNTSSMLASRLESDATLLRTVVVDRTTILIQNLGLIGTSFIIAFILNWRLTL
IVMAMYPLIISGHISEKMFMKGYGGDLSKAYLKANMLAGEAVSNIRTVAAFCSENKVLDL
YSRELVGPSKQSFNRGQVAGLFYGVSQFFIFSSYGLALWYGSVLMERGLSGFKSVMKSFM
ILIVTALAMGETLAMAPDLLKGNQMVASVFEVLDRRTQVVTDVGEDITRVEGSIELKGVH
FSYPSRPDILIFKDFDLKVRAGKSMALVGQSGSGKSSVLSLVLRFYDPTSGKVMVDGKDI
KKLKLKSLRSHIGLVQQEPALFATSIFENILYGKEGASEAEVIEAAKLSNAHSFISSLPE
GYSTKVGERGIQLSGGQKQRVAIARAVLKNPAILLLDEATSALDVESERVVQQALDRLMK
NRTSVVVAHRLSTIKNADEISVIQNGKIVEKGTHSSLVENENGAYSKLINLQQQEQHHRK
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacagcctcagcctcggtctccgtcgacggcggtggcggtggcggtggcgac
accaaagatgatcagaaaaaaccttcacaaacccccaaacccaaaaaagtttcgatgcta
aaactgtttgcattcgccgattcatatgattacctccttatgtttcttgggtccgtcgga
gcatgcattcacggtgcatcggtgccggttttctttatctttttcggcaagttgatcaac
atcatcggactcgcttatctttttcccaaagaagcttctcataaagttgccaagtattca
ttggattttgtgtacctaagtgtggtcatactgttttcttcttggattgaggtggcttgt
tggatgcatagtggagaaaggcaagcagcaaagatgagaatggcttatttgaggtcgatg
ttaagccaagatatcagtctttttgacactgaagcttcaactggagaagttatttctgca
attacgagtgatataatcgtcgttcaagatgccatttctgagaaggtggggaacttcatg
cactacatcagcagattcttatcaggattcataattgggttcgttagagtttggcagata
agtttggtgactttgtcaattgtacctgccattgcaattgcaggtggcgtctatgcttac
gtcgccaccggcctcatcgtgcgagtccgaaaatcttacgtcaaggccggtgaaatcgct
gaagaggtgattgggaatgtacggacagtgcaagcgttttctggagaagagaaagcggtg
aattcttacattgcagccttgtcgaacacgtacaaatatggcaagaaagccggtctggcc
aaaggcttgggccttggcactctgcattttgttctcttcctctcttggtccttgctcgtt
tggtacactagcatcgtcgtccataagaacatcgctaatggtggtgattcgttcaccact
atgctcaatgtcgtcattgccggcctgtcgcttgggcaggcggcaccggacatcagtgcc
ttcatcagggccaaggcggcggcataccccatttttgaaatgatagagaggacgacggtt
gccaaaacgagtgcgaaaatgggccggacgcttgccaaggtggatggtcacatacggttt
gatgacgtgcagtttagttacccatcaagaccagatgtgatgatctttgacaaacttcgt
cttgatataccttccggaaaaattgttgcacttgttggcggtagcggttcagggaagagc
acagttatatcattgatagaacggttctacgagccgctatctggtcagatcctgttagat
ggaaccaatctacgtgaactcgacatcaaatggctcaggcaccagattgggctggtgaat
caagagcctgctctttttgcaacaaccataagggagaatatcttgtacgggaaggattcg
gctacctacgaggagatcacacatgccgcaaagttatcagaagcaatcacgttcattaac
aatcttccagagagattcgagacgcaggtaggagaacgagggatacaactatcgggagga
caaaagcaacggattgcaatatcacgagcgatagtgaagaacccgtcaatacttctttta
gatgaagcgacaagcgccctcgacactgaatctgaaaagagcgtgcaagaggcgcttgac
cgtgtgatggtgggaaggacaactgtgatcgttgcccatcggctttccaccattagaaat
gcagacacgatagccgtggttcaacatggaaagatagtcgaaaccggaagccatgatgag
ctaatgtcccgacctgatagcgcttattcatcactcgttcaacttcaagaaacggcttcc
ttgcatcgtgccccatcacgcgttccatccatgggaagaccatccagcttaaaattttct
cgcgagctatcacggactaccacacggagtataggggctagttttcattccgatcgagaa
tccgttggcaagctcggtgttgaaggtgttgaatacgccaaggcaccacgcgtttcctca
aaaagattatactcaatgatccgtcccgattgggcttatggcttaacgggcaccataggc
gccctaatcgcaggatccttgatgcctctctttgctcttgggatcagccaagccctcgtg
gcttattacatggactgggaaaccacgcagcatgaggtcagaaaaatcgccgttctcttt
tgcttaggtgctggagtaagtatcaccgtttacgccatcactcatctatgctttgggatc
atggcagaaaggctcactcttcgtgttcgtcaaaagatgttttcagctattttgagaaat
gagattggctggttcgatgacaccaacaacacaagctcgatgctcgcttcccgtttagaa
agtgatgcaactttactaagaacggttgttgtagatcggacaacgatactgatacaaaat
ttggggttgatcggcacttccttcatcatcgccttcatcttgaactggaggcttacactt
atcgtgatggccatgtaccctttgatcattagtggtcacataagcgagaaaatgttcatg
aaagggtatggtggtgatctgagcaaagcttatcttaaagctaatatgcttgctggtgag
gctgttagtaacataagaacagttgcagcattttgttctgaaaacaaggtgctcgatctt
tattctcgagagctcgttggaccttccaaacagtcgtttaaccgtgggcaggttgctggc
ctgttttacggtgtatctcagttcttcatattctcatcatacggccttgcgttgtggtat
ggttcggttttgatggagagggggttatcaggcttcaaatcggtcatgaaatcattcatg
attctgattgtaaccgcgttggccatgggtgaaacgctagcaatggcaccagacttattg
aagggaaaccagatggtagcttcggttttcgaggttctcgaccggagaacacaagttgtg
actgacgtcggagaggatataacgagagtggaagggtcaattgagctgaaaggtgtccat
ttcagctacccttcgagacccgacatcttgattttcaaggatttcgatctgaaggttcga
gcaggcaagagcatggcactggtgggacaaagtggctcggggaagagctccgttctctcg
ctagttctccgcttctacgatccaacctctgggaaagtcatggttgatggaaaggacatt
aagaagctaaagctaaagtctctacgaagccacatcgggctagtccagcaagaaccggct
ctttttgcaacatcaattttcgaaaacatactttacgggaaagaaggagcctcagaagct
gaagtgattgaagctgctaagctatcgaacgcacatagtttcattagttccctcccggag
ggctactcgacaaaagtcggagagagaggaattcaactttcaggtggacaaaagcagagg
gtagctatagcaagagccgtcctaaagaatccagcaatattactgttggatgaagccacg
agtgctcttgatgtggagtcggagcgtgtggttcaacaggctttagatcggctaatgaag
aacagaaccagtgtggtggttgcacacaggctatcgactattaagaatgcagatgagata
tcagtaatccaaaatgggaaaatagtggagaaagggactcattcaagtctcgttgagaac
gaaaacggggcttattcaaagctaatcaacctacagcagcaagaacagcatcaccgtaaa
taa
DBGET
integrated database retrieval system
