KEGG   Cynara cardunculus var. scolymus (artichoke): 112529670
Entry
112529670         CDS       T05604                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020  RNA polymerase
ccav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112529670
  09124 Replication and repair
   03420 Nucleotide excision repair
    112529670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccav03021]
    112529670
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112529670
Transcription machinery [BR:ccav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112529670
  RNA polymerase III system
   RNA polymerase III
     112529670
  RNA polymerase I system
   RNA polymerase I
     112529670
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112529670
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 zinc_ribbon_13 HypA DUF1451 zinc_ribbon_10 OrfB_Zn_ribbon zf-ribbon_3 Zn-ribbon_8
Other DBs
NCBI-GeneID: 112529670
NCBI-ProteinID: XP_024996776
LinkDB
Position
LG 16:complement(2531304..2534950)
AA seq 51 aa
MDPQPEPVTYICGDCGQENTLKVGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatccacagccagaaccagttacttacatatgcggagattgtgggcaggagaatacg
ttgaaggttggtgatgtgattcagtgtcgggagtgtggttaccgtatcctgtacaagaag
cggacccgtagaattgttcagtacgaagctcgttga

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