Caretta caretta (Loggerhead turtle): 125623797
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Entry
125623797 CDS
T09292
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125623797 (SLC6A4)
Transporters [BR:
ccay02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125623797 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
125623797
NCBI-ProteinID:
XP_048679651
EnsemblRapid:
ENSCECG00000000805
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Position
17:complement(21384185..21428000)
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AA seq
666 aa
AA seq
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MEKSSSNENQPLTSKKELLDCTEGEDCKENGLLVKNPKSALQLVEDGNKVHPSQGDKGEA
GQISNGYSVVQNPVPCDGIADGEDVQCMAPAATSTTTSTTCGVEAQPQLLEPEERETWSK
KMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQYHR
NGCISVWRKICPIFKGIGFTICIIALYIASYYNTIMAWALYYLISSFTVELPWISCKNAW
NTGNCTNYFINASITWTPHSISPAEEFYTRHVLQVQRSKGLDDLGGISWQLTLCLLLIFT
IVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVVFYLKPDWQKLLATE
VWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIFTVLG
YMAEMRNEEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAGLE
GVITAVLDEFPHVWSKRREWFVLGLIIACFLGSLTTLTFGGAYVVKLFEEYATGPAVLTV
VFLESIAVAWFYGINQFCSDMKEMLGFTPGWYWRLCWVAISPIFLLFIICSFMSSTPDLR
LFDYNYPYWTTIVGYCIGTSSVICIPIYMAYRLIITPGTFKERILKSITPETATEIPFGD
IRMNAV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatccagcaatgagaaccagcctctgacttctaagaaagagctcttggac
tgtacagaaggtgaagattgcaaagagaatggactcttggtcaagaaccctaaatctgcc
ctgcagctggtcgaggatgggaataaggtccaccccagccagggagacaaaggggaagca
ggtcagatctcaaatggctactcagtggttcagaacccagttccgtgcgatggaatagca
gatggggaagatgtccagtgcatggccccagcagccacaagtaccaccacttccaccact
tgtggggtggaagctcaaccacagctgctggagccggaggaaagagagacctggagtaaa
aaaatggactttcttctctctgtcattggctatgcagtggatctgggcaacatatggcga
tttccctatatatgctaccaaaatggaggaggagcatttctcatcccgtacacgatcatg
gccatctttggaggcatcccgctcttttacatggaactagctctgggacagtaccacagg
aatgggtgtatctcagtttggaggaaaatttgtcctattttcaaaggaattggctttact
atctgcataatagctctctacatagcctcttactacaataccatcatggcttgggccctc
tactacctcatttcatccttcacggtggagctgccatggatcagctgcaaaaatgcttgg
aacaccggcaactgcaccaactacttcatcaatgccagcattacctggaccccacactcc
atctcccctgcagaagaattttatacccgccacgttctacaggtgcaaagatccaaaggg
ctggatgatctgggaggcattagctggcaattgaccctctgcttattgttgattttcact
attgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtgtgggtgact
gccacgttcccttacatcatactctttatcctgttagtacgaggggccacattgcctgga
gcctggaggggggttgtcttctacctgaagcctgactggcagaaactcctggccactgag
gtctgggtggatgctgcagctcagattttcttctctctaggtccaggttttggggtccta
ctagcttttgccagctacaacaaattccacaacaactgctaccaggatgcactggttacc
agtactgtgaactgcatgactagttttgtgtctggatttgtcattttcactgtgcttgga
tatatggctgaaatgaggaatgaagaggtgtcagaggttgctaaagatactgggcccagc
cttctcttcattacctacgcagaggccattgcaaacatgcctgcttcaaccttttttgcc
atcatatttttcttgatgttactcactctgggattagacagcacgtttgcaggactggag
ggggtgatcactgcagtgctggatgaatttccacatgtctggagcaagcgcagggaatgg
tttgtccttggtctgatcattgcttgcttcctggggtcattaacaactctgacatttggt
ggtgcatacgtagtgaagctgtttgaagaatatgctacaggccctgctgtcctaacagtg
gtgtttctggaatccattgcggtggcctggttctatggcatcaaccagttttgcagtgac
atgaaggaaatgctgggcttcactccaggctggtactggcgactctgctgggtagcaatc
agccccatctttcttttgttcatcatttgcagttttatgtccagcactcctgatctacgg
ctttttgattataactatccctattggaccactatagtgggttactgcataggaacctcc
tctgttatctgcattccaatctacatggcttatcggttgataatcaccccaggaacattt
aaagagcgtattctaaaaagcattactccggagacagccacagaaattccctttggggac
atccgcatgaatgcagtttaa
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