Caretta caretta (Loggerhead turtle): 125627724
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Entry
125627724 CDS
T09292
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03020
RNA polymerase
ccay04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125627724 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125627724 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125627724 (POLR3B)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125627724 (POLR3B)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125627724 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125627724
NCBI-ProteinID:
XP_048688120
EnsemblRapid:
ENSCECG00000022772
LinkDB
All DBs
Position
1:247557888..247681682
Genome browser
AA seq
1132 aa
AA seq
DB search
MDALAAELGALTPEQAAAPVNTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGIPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDIPIAIIF
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTILTHVPVKEFHFRAKCIYTAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFL
NGNILGVIRDHPKLVHTFRLMRRAGYINEFVSISTNLADRCVYISSDGGRLCRPYIIVKK
QKPAVTDKHMEELAQGYRNFEDFLHEGLVEYLDVNEENDCNIALYEHTITKATTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKR
YTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSNVPQQPQYKDVPVTYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttagcggccgagctgggggctctgaccccggagcaggcggcggctcccgtg
aacacggtggaggaaaaatggagacttcttccagcttttctaaaggtgaagggacttgtg
aagcagcacatagactcattcaactatttcatcaatgtagagataaagaaaatcatgaaa
gctaatgaaaaagtcacaagtgatgctgacccaatgtggtatttgaaatacctcaatatc
tatgtggggattccagatgttgaagaaagctttaatgtaacaagacctgtgtctcctcat
gagtgtcgcttgagagatatgacctactctgccccaattacagtggacattgagtacact
agaggtagccagagaattattcgcaatgcattacccattggcagaatgcctataatgctg
cgcagctccaattgtgttcttactgggaaaactccagcagagtttgccaaacttaatgaa
tgccctttagatccaggtggctacttcattgtcaaaggtgtagagaaagtcattcttatt
caagagcagttatccaaaaacaggatcattgtggaagctgacagaaaagggacagttgga
gcttctgttaccagttccactcatgagaagaagagcagaacaaatatgattgtgaaacaa
ggaagattttacctgaggcataacactctgtcagaagatattcccattgctattatattt
aaggccatgggtgttgagagtgaccaagagattgtgcagatgattggtacagaagagcac
gtgatggctgcatttgctcccagtttggaagaatgccagaaagctcagatttttacacag
atgcaggcattaaagtacataggaaacaaggtacgaaggcagaggatgtggggaggccca
aagaaaacgaagatggaggaagcacgagagctgctagcatcaaccatcctgacacatgtt
cctgtaaaagagtttcatttccgtgccaagtgcatctacacagcagtgatggtccgcagg
gtaattctggcccaaggagaaaacaaagtagatgaccgagactattatggaaacaagcga
ttggaattggctggacagcttctttcccttctctttgaagatttgttcaaaaaatttaac
tctgaaatgaagaagattgctgatcaggtcattccaaagcagagagcagcccagtttgat
gtagtgaagcatatgcgtcaagatcagatcaccaatggcatggtaaatgccatctctact
ggaaattggtcactgaaaaggttcaaaatggaccgccaaggtgtgacacaggtattgtcc
cgcttgtcttatatatcagctctgggaatgatgacaagaatctcttctcagtttgaaaag
acaagaaaagtgagtggcccccgatctcttcagccatctcagtggggtatgctttgccca
tcagacactcctgaaggagaggcttgtggtttggttaaaaacctagctctgatgactcac
attactactgatatggaagatggcccaattattaaattagccagtaaccttggagtagaa
gatgtaaacttactatgtggagaagaactttcatatccaaatgtgttccttgtcttcctt
aatggtaacatccttggtgtcattcgcgaccatccaaaactagttcacacgtttcggcta
atgcggcgagcaggttatatcaatgaatttgtttcaatctccacgaatcttgctgacaga
tgtgtctacatttcctctgatggaggaagattgtgcagaccctacataattgtaaagaag
caaaaacctgcagttacggacaagcatatggaagaacttgctcagggatacaggaatttt
gaagattttttgcatgaaggcctagttgaatatttggacgtgaatgaggaaaatgactgc
aacattgcactgtatgaacatacaattactaaagctacaacacacttggagattgaacct
ttcacgcttcttggcgtctgtgctggtcttattccatatcctcaccataaccagtcccca
agaaacacttaccagtgtgctatggggaagcaagcaatgggtaccattggatacaatcaa
cgaaacagaattgatactcttatgtatctgttagcatatccacaaaagccaatggttaaa
acaaaaaccattgaactgatagagtttgagaaactgccagctggacagaatgccacagtt
gctgtgatgagctacagtggttatgatattgaagatgctcttgtgttaaacaaggcctcc
ttggacagaggatttggaaggtgtcttgtgtataagaatgccaagtgtacactgaagcgc
tacacaaatcagacattcgacaaagtgatgggtccaatgttggatgcagctacacgtaaa
ccaatttggcgtcatgaaattttagatgctgatggtatttgctctccaggtgaaaaagta
gaaaacaaacaagtgcttgtgaacaagtccatgccaactgtgacccagactcctctggaa
ggaagtaatgttcctcaacagccacagtataaagatgtaccagtaacatacaaaggtgca
actgattcatatattgaaaaagtaatgatctcttcaaatgcagaggatgcttttttgatc
aaaatgttgttgagacaaactagacgtccagaaattggagataaatttagcagtcgtcat
ggacaaaaaggggtgtgtgggctgatagtacctcaggaggacatgccattttgtgataca
ggaatctgtccagatatcattatgaatcctcatggcttcccatcgcgtatgacggtggga
aaattaattgagctcttggcagggaaagctggtgtcctagatggcagatttcactatgga
acagcttttggaggtagtaaagttaaggatgtgtgtgaagatctcattcgccatgggtat
aactacttagggaaggactacgtaacatctggcatcactggagaacccttggaagcatat
atctattttggtcctgtgtattaccagaaactaaagcatatggtgttggataagatgcat
gccagagctcgaggccctagagctgtccttaccaggcaacccactgaaggtcgatcgcgt
gatggtggtttacgtcttggagaaatggaacgagattgtttaataggttatggagccagc
atgcttttgctggagagactgatgatttcaagtgatgcctttgaagtggatgtctgtgga
cagtgtggcttgctgggatattctggctggtgccattactgcaagtcgtcttgccatgtc
tcatccctgcgcattccatatgcctgtaaactattattccaagaacttcagtctatgaac
attatacccaggctaaaattggctaagtacaatgaatga
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integrated database retrieval system
