Caretta caretta (Loggerhead turtle): 125630897
Help
Entry
125630897 CDS
T09292
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00531
Glycosaminoglycan degradation
ccay01100
Metabolic pathways
ccay04142
Lysosome
Module
ccay_M00076
Dermatan sulfate degradation
ccay_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125630897 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125630897 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ccay02042
]
125630897 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125630897 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccay00537
]
125630897 (SPAM1)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
125630897 (SPAM1)
Bacterial toxins [BR:
ccay02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
125630897 (SPAM1)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Enzymes
125630897 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccay00537
]
Enzymes
125630897 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
125630897
NCBI-ProteinID:
XP_048693075
EnsemblRapid:
ENSCECG00000020985
LinkDB
All DBs
Position
1:complement(341247968..341257331)
Genome browser
AA seq
577 aa
AA seq
DB search
MALYIQSHSLTEMETLRQVQSFGSFVASIRASWLVFIIILVTYSSSLHIRARPLIPNSPF
LSIWNAPTELCSEKTGVQLDLRTFHLVGSTLKTSTEQSITIFYADRLGNYPYIDENTGET
FNGGIPQLCSMEHHLKKASDDVNFYIPSDEQVGLAVIDWENWRPLWIRNWGSKDIYREES
VEFVQQKDLSISEIQARTLAKMEFEAAAKSFMLQSLKLGISMKPNQLWGYYLYPDCYNYD
YNQNPHNYTGSCLDIEIARNNELNWLWEESTALYPSVYLETALRSSKNAPLFVRNRVQEA
IRVSNVSNSTCPLPIFVYTRPVFTDFNQEYLSQDDLVNTIGESAALGVSGIVIWGDLNLT
LSVNTCRTLDSYLRHTLNPYIINVTMAAKICSQALCQDSGACARKNWNSSDYLHLNPENF
VIQMSKNGKYAIQGQPSFQDLQRFIEKFYCRCYAGYNCELRVDINDIHYINACISEDICV
HVSLNSLSNVEASSNTSIFSFIPQRNITLPAHNATKDFQQTIWNNTFNVSTAGHINVPIN
SSGDLKITDTHSFSGSSSDEMKILDVVCLILILRNLI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtacatacagagccattcactaactgaaatggaaaccctaaggcaagtccaa
agctttggtagctttgttgcctctatcagagcatcctggctggtgttcatcattattcta
gttacttacagctcatctttgcatataagagcccgtcctctcatccccaattctcctttc
ctctccatctggaatgcccctacagagctttgcagtgagaagactggagtgcagctggat
ttgagaaccttccacttggtaggaagcacactgaagacatccactgagcagagtattact
atattctatgcagacaggctcggcaattatccttacatagatgagaacacaggtgagaca
tttaatggtgggatcccccaactgtgttccatggagcatcatttaaagaaagccagtgat
gatgttaatttttacatcccttcagatgaacaggttggcttggctgtcatcgactgggaa
aactggaggccactatggatacggaactggggatcgaaagacatttacagagaggagtct
gttgagtttgttcagcaaaaagatttaagcatatcagaaatccaagccaggactttagcc
aaaatggaatttgaagctgcagcaaaatcatttatgttgcagtctttaaaactgggaata
tcaatgaagccgaatcaattgtggggatattacctttaccctgactgctataactatgat
tacaaccaaaatccccacaattatacaggaagctgtttagatattgaaatagcaagaaat
aatgagcttaattggttgtgggaggaaagcacagcactttacccatctgtctatctggaa
acggccttgagatcttccaaaaatgcaccactctttgttcgtaacagagttcaagaagcc
attagagtttctaatgtttccaattccacctgtccacttcccatttttgtatatacacgt
ccagtattcacagatttcaatcaggaatatctctctcaggatgaccttgtaaataccatt
ggagaatctgctgcattaggggtgtctggaattgtaatctggggagacctgaatttaaca
ctgagtgtgaacacttgcaggactctggacagctaccttaggcacactctgaacccttac
atcatcaatgtaaccatggcagccaaaatctgtagtcaggcattatgccaagactctggt
gcatgtgcacgaaagaactggaactccagtgactatcttcatctgaacccagagaatttt
gtcattcagatgtcaaagaatgggaaatatgccatacaagggcagccatcctttcaggat
ctgcagcgatttatagaaaaattttattgccgctgttatgcaggctacaattgtgaactt
agagttgatataaatgacatccactacatcaatgcctgcatttcagaagatatttgtgtt
cacgtatccttaaattcactttctaatgtagaagcctcttccaacacgagtatattttca
tttatcccacagagaaacataacattacctgcacataatgcaacaaaagattttcagcag
actatttggaataacacattcaatgtatctactgcaggacacatcaacgtcccaattaac
agcagtggtgatttaaagataactgatacgcatagcttcagtggctcgtcttctgatgag
atgaagatactggatgtggtttgtttaattctaattttgagaaacctaatctaa
DBGET
integrated database retrieval system