Caretta caretta (Loggerhead turtle): 125631262
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Entry
125631262 CDS
T09292
Symbol
LCMT2
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125631262 (LCMT2)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
125631262 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
125631262 (LCMT2)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125631262 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_5
Kelch_2
Kelch_1
CecR_C
RAG2
Motif
Other DBs
NCBI-GeneID:
125631262
NCBI-ProteinID:
XP_048693607
EnsemblRapid:
ENSCECG00000018342
LinkDB
All DBs
Position
1:complement(5859..85137)
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AA seq
772 aa
AA seq
DB search
MEQPLAPPFPPPATRESDQYPPPVAAGPRRAALSAPEAELYRHPGRRRKPLSMVSGGPLY
PAGGFSLLRLXVRPALLCGRRLPCGRGMGRSRSARRAARDQAIQGTNDSSIVSKCSTAAL
GYIQDGFLQYFVTKRCRRAPLIHWGYYVRARAVDHCVREFLLQSQGHPRRQILSFGAGFD
SLYFRLKAVGLLSCTVVYEVDFPSVASRKAALIKGTENLAMVVGGVGGRESGAMTFSVED
YKLLGVDLSELSKLEQALKEAGLDPEVPTMLLAEVVLAYMEISRSDALIQWAAQHFPCAQ
FVVYEQMHPEDPFGRIMQQHFSRLNSVLHTLAQYPNCEAQRRRFLQRGWAECSIIDMNEF
YASFIPEDERRRVQALEPFDEYEEWHLKCSHYFILAASKGKELAWTPLFSKMPAFSADDP
PRVAGSISASVCTIDSEIAGLRRYGHHSVLIKPHVVLTTGGFGEQDGRHCRLRDFHVLIR
HEDNWRVGSVKMEKPGNTWGGRLFHTVTCVSGSQALAVGGRMSPTNADLGILWLRFPESM
TASDPDCVVVELVSPQSAEDIASSRWRHTTTEVTCQGQKYLFIYGGRSAVQPVLGDWSFL
HLEEFSCRKIPVGGPVPEGRHSHSACSWNGGALIAGGLGAAEQPLNSVLFLRPTGSGFQW
QGVETHPPFIPRYSHTAHVHNGKLLLVGGVWLHSASVPGVTVIDLMTGFSLDYQIDTVSL
NWPLMLHNHSSIFLPDKRELLLIGGGGNCFSFGTHLNLRPVCVCLSNILTSQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgttagccccgccctttcctccacccgcgaccagagagtcggaccaatac
ccgcctcctgtggcggccggccccaggcgggccgctctatccgccccggaggctgagctc
tatcgtcaccctgggcgccgccggaagccgctctctatggtctcaggcgggccactctac
ccagcgggaggtttctcactgctcagactcnnggtccggccggcgctgctgtgcgggcgc
cggttgccctgtggccgcgggatggggcggagccggagcgcgcggcgcgcagcgcgggac
caggcgattcagggcactaacgacagcagtattgtcagtaaatgctccaccgctgctctt
ggctacatccaggatggcttcctacagtacttcgttaccaagagatgcagacgagcgccg
ctgattcattggggttactatgtccgggcccgagctgtggatcattgtgtgcgagagttt
ctgctacagagtcaaggccaccccaggagacagatcctttcttttggtgctggctttgac
tccctgtatttccgcctaaaggctgtgggtcttctgagttgcactgtggtgtatgaggta
gatttcccaagtgtggcaagccggaaagctgctctgatcaagggtacggagaacctggcc
atggtcgtgggaggagttggagggagagaatcaggagccatgaccttttctgtggaggat
tataaattgctgggagtggatttatctgagctgtctaagctggagcaagccctaaaggag
gcaggcctggaccctgaggttcccaccatgcttttagcagaagtggtgctcgcttacatg
gagatcagcaggtcagatgctttgatccagtgggcagctcagcacttcccctgtgcacag
tttgtggtctatgagcagatgcaccctgaggacccctttggtcgcatcatgcagcagcac
ttcagccggctgaactctgtgctgcacaccctggcccagtatcccaattgtgaggcgcag
aggagacgctttctccagcggggatgggccgagtgcagtatcattgatatgaatgagttc
tatgccagctttatccccgaagatgagcgacggagagtgcaggctctggagccctttgat
gaatatgaggaatggcacctgaaatgttcacattactttatcctggctgcatcgaagggg
aaagagcttgcctggactcctctgttctccaagatgccagctttctctgctgatgaccct
cccagagttgctggtagcatctctgcatctgtgtgcacaatagattctgaaattgctggc
ctgaggcggtatggccaccactctgtacttatcaaaccacatgtggtcctcactactgga
ggcttcggggagcaggatggacgacactgccgcctaagagatttccatgtcctaatcaga
cacgaagacaactggcgagttggaagcgtgaaaatggaaaagcctggtaacacctggggt
ggacggttgttccatactgtgacgtgtgtttctggaagccaggccctggcagtgggaggg
cgaatgtccccaacgaatgcagatttggggatcctttggctaaggtttcctgaatccatg
actgcctcagacccagattgtgttgtggtggaacttgtgagcccacagtctgctgaggac
atagcctcatcgcgctggagacatactacaaccgaagtgacgtgccaaggccagaagtac
ttgtttatctatgggggccgctctgctgtgcagcctgtcctgggagactggtctttcctg
catttggaagagttctcctgcagaaagattcctgtcggggggccagtccctgaaggccgt
cactctcacagtgcctgcagctggaacgggggagcactcattgcagggggcctgggagca
gctgagcaaccattgaactcagtgctctttctgagaccaactgggagtggctttcagtgg
cagggtgtagagactcaccctcctttcatccccagatattcacacactgcccatgtacat
aatgggaaactcctgcttgtggggggagtatggcttcactctgcatcagtacctggtgtg
actgtgattgacctgatgacaggtttcagcttggattatcagattgacacagtgtccctg
aattggccattaatgttgcacaatcacagcagcatcttcctgccggacaaaagagagctg
ctgctcattggtggtggtgggaactgcttctccttcgggacccatctcaacctgcgcccc
gtctgcgtatgcctcagcaacatcctgaccagtcagtga
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