Caretta caretta (Loggerhead turtle): 125636464
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Entry
125636464 CDS
T09292
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03022
Basal transcription factors
ccay03420
Nucleotide excision repair
ccay04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125636464 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
125636464 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125636464 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccay01001
]
125636464 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125636464 (CDK7)
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125636464 (CDK7)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125636464 (CDK7)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
125636464 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
125636464 (CDK7)
Protein kinases [BR:
ccay01001
]
Serine/threonine kinases: CMGC group
CDK family
125636464 (CDK7)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125636464 (CDK7)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125636464 (CDK7)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125636464 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
Haspin_kinase
FTA2
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
125636464
NCBI-ProteinID:
XP_048705519
EnsemblRapid:
ENSCECG00000017162
LinkDB
All DBs
Position
5:42893600..42930229
Genome browser
AA seq
444 aa
AA seq
DB search
MSVRRLATVARAGRWRRAQDAAAPGKAHAQGARGRGRFRVQGRKQRASQVVTVLNPPGPA
GSFPRPVMDARARAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI
NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDSSLVLTQSHIK
AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVT
RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFETLGTPTED
QWPGMSSLPDYVTFKSFPGMPLQHIFSAAGDDLLDLLQGLFIFNPCTRVTATQALKQKYF
SNRPGPTPGIQLPRPNCPVEALKEQQNSLLNLKRKRTEGIDQARLHPTTGLYMFSYVECT
CSEILSFENLLDSSALWSCTNKAL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgtcgcttagcgactgttgctagagcgggacgctggcgtcgtgcgcaggac
gccgcagcccctggtaaagcgcatgcgcagggagctcggggaaggggccggttccgtgtg
cagggccggaagcagcgggcgtctcaggtagtgacggttttaaatccccctggcccggcc
ggctcctttccccggccggtgatggatgcgcgggcgcgagctaagcgctacgagaagctc
gacttcctgggcgaggggcagtttgccactgtttataaagcaagggataagaacaccaat
caaattgttgctattaaaaagattaaacttggacatagatcagaagctaaagatggaatc
aacagaacagccctgagggagataaaattgttacaggagctaagccatccaaatatcatt
ggtcttcttgatgcatttggacacaaatccaatattagtctggtctttgattttatggaa
acagatctagaggttataataaaggatagtagtcttgtgctgacacaatctcacatcaaa
gcatatatgctgatgacacttcaaggactggaatatttacatcagcactggattctacac
agggatctcaaaccaaacaatttgttactagatgaaaatggggttctaaaattggctgac
tttggcttggcaaaatcttttggaagcccaaatagagtctatacacaccaggtagtaaca
aggtggtatcgagcacctgagctactgtttggtgctagaatgtatggtgtaggtgtagat
atgtgggctgttggctgtatcttagcagaactgcttcttagggttccttttttgccagga
gactctgatcttgatcagctgacaaaaatatttgaaacgctggggactccaacagaagac
cagtggcctggcatgtcaagtcttccagattatgtaacatttaaaagtttccctggaatg
ccacttcaacatatcttcagtgcagctggtgatgacttgctagatcttctccaaggtcta
ttcatatttaatccttgtactagggtcacagctacacaggcattgaaacagaagtatttt
agtaatcgaccaggaccaacaccaggaattcaattgccaagaccaaactgtcctgtagaa
gccttaaaggaacaacaaaattcacttttaaatttaaaaaggaagagaacagaaggaata
gatcaagccagacttcatccgactactggcctctacatgttttcatatgtagaatgtacc
tgctcagagatcctgagctttgagaaccttttggacagcagtgccctctggagctgcaca
aacaaagccttatag
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