Caretta caretta (Loggerhead turtle): 125639827
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Entry
125639827 CDS
T09292
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03020
RNA polymerase
ccay04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125639827 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125639827 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125639827 (POLR3A)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125639827 (POLR3A)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125639827 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125639827
NCBI-ProteinID:
XP_048713518
EnsemblRapid:
ENSCECG00000010754
LinkDB
All DBs
Position
7:complement(65048489..65101116)
Genome browser
AA seq
1389 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRILLSSE
ERKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSSFLQSFETAIEHNKEVESLLGRAQENLTPLMVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANLNFMRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSIILKPSDDCAVKANLRTKGKQYCGRGEDLCVNDSYVTIQNSQLMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNDG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHCKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNELVLTAESIMKKVEFLC
CQDSFLQEIKKFIKSVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAHLDKDDDSDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKIV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLIFD
NEFHIPLIT
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagaccgacgtggccaagaaaataagccacatctgcttt
ggcatgaaatctccagaagagatgcgccagcaagctcacattcaggtggttagtaagaac
ttgtatagccaggacaaccaccacgctccactgcagtatggagtgctggaccatcgtatg
ggtaccagtgaaaaggaccgtccatgtgaaacctgtgggaagaatctagctgactgttta
gggcattatggctacattgacttggagctgccgtgtttccatgttgggtactttaaagct
gtcataggcatcttacagatgatctgcaagacctgttgccgtatcctgttgtcttcagag
gagaggaaacagtttttggattatctgaagaggcctggtctgacctacctgcagaaacgg
ggattgaaaaagaaagtctctgaaaaatgcagaaagaaaaacacctgtccttattgtggt
gctttcaatggtactgtaaagaagtgtggcttattgaagataatccatgagaagtacaag
accaataagaaagtggtggatccaatagtatcaagttttcttcagtcctttgaaactgcc
atagaacataacaaagaagtagaatccttgctggggagagctcaggagaacttgactcct
ttaatggtgttgaacctctttaaaaggatcccagcggaagatatacctctgcttctgatg
aatccagaagcaggaaagccttcagacttgatcctgacacgactcctggtacctccattg
tgcatcagaccctctgttgtgagcgacttgaagtctggcaccaacgaagatgacttgacg
atgaagcttacagagataattttcctcaatgatgtaatcaaaaagcataggatatcggga
gccaaaacacagatgattatggaagactgggacttcctacagctacagtgtgccctctac
attaacagtgagctctctggaattcctcttaacatggcacccaagaaatggaccagaggt
tttgttcaaagactcaaagggaagcagggtcggtttagaggcaatctgtctggaaagcga
gtggacttctcgggcagaacagtcatttcacctgatcccaacttacgaatagatgaagtg
gctgtgcctgttcatgttgccaaaatattaacattccctgaaaaagtgaataaagctaac
ctaaattttatgaggaaacttgtacggaatggtcccgaagttcaccctggagccaatttc
attcaacagaggcacacacaaatgaaaaggtttttgaaatatggaaaccgtgagaagatg
gctcaggagctcaagtatggtgacattgtagagaggcatctcatagatggggatatagtt
ctgttcaaccgacagccctctctgcacaagctgagcatcatggctcacatagcgagagta
aagccccacaggaccttcaggtttaatgaatgtgtctgtacaccatacaatgctgatttc
gatggagatgaaatgaaccttcatcttcctcaaacagaggaggccaaagcagaagcactg
attctcatggggaccaaagcgaacttggtaacaccaagaaatggagagcctttgattgct
gctattcaagattttcttacaggtgcctatcttctcacactaaaagacaccttttttgac
cgagccaaggcctgtcaaattattgcttctatcctggttggcaaggatgagaagattaaa
gttcgccttccacccccagcaatcctaaagcctgtaaccctgtggacaggaaagcaggtc
ttcagcatcattctcaaacctagtgatgactgtgctgtgaaagccaatctccgaaccaaa
ggaaaacaatactgtggcagaggagaggatctgtgtgtcaatgattcttatgttacaatc
cagaatagccagttgatgagtggcagtatggacaaaggaaccttaggatctggatccaag
aacaatatcttttacattctgctgagagactgggggcaggtagaggctgcggatgctatg
tcacggctagccagacttgctcctgtttacctctctaaccgtgggttctcaattgggatt
ggtgatgtaactccgggacaggggctgctaaaggctaaatatgaacttctgaatgatggc
tataagaaatgtgatgagtacattgaagctttgaacactggtaagctgcagcagcagcct
ggctgtactgcagaagagacattagaggccttaatccttaaagaactctctgtgatcaga
gaccatgctggcagtgcctgtctcagagaactcgataagagtaacagtccacttatcatg
gctctctgtggttctaaaggttccttcattaacatatcccagatgattgcctgtgtagga
cagcaggctatcagtgggtcacgcgtgcctgatggatttgaaaataggtctctgcctcac
ttcgagaagcactgtaagcttccagctgcaaaaggttttgttgccaatagcttctattct
ggcttgactccaactgagttcttcttccatacaatggctggtcgggaaggtctagtggat
acagctgtaaaaacagccgaaactggatatatgcagagacggctggtgaaatctcttgaa
gatctttgctctcaatatgatctcactgtcagaagttctactggtgacattatacagttc
atttatgggggagatggcttagatcctgctgcgatggaagggaaagatgaacctttggaa
ttcaagcgagtcctggacaacatcagggcggtatatccatgtcaaagtgaaccagctctt
agtaaaaatgaattggtgttaactgctgagtccatcatgaagaaagttgaattcctttgc
tgtcaagacagtttcctacaggagattaaaaagttcatcaaaagcgtttctgaaaagatc
aaaaaaaccagggacaagtatggcattaatgacaatggcacaacagagccacgtgtcttg
taccaattggatcgaattaccccaacgcagctagagaagtttctagagacctgtagggac
aaatacatgagggcacagatggagcctggctctgcagtaggagctctgtgtgctcagagt
attggtgagcctggcacacagatgactctgaaaaccttccactttgctggtgttgcctca
atgaacatcactctgggtgttcctagaatcaaagaaattattaatgcctccaaagcaatc
agcacacctattatcacagcacacttggacaaggatgatgattctgattttgcccgtctg
gttaagggaagaattgagaaaaccctattaggagagatttccgagtacattgaagaagtg
tttcttcctgatgattgctttatactggtcaaactctctctggagcggattagactgctg
agactagaggtgaatgcagagactgtgcgatattctatctgcacttctaagctaagagtg
aagcctggggatgttgccgttcatggagaggcagttgtttgtgtgacccctcgtgagaat
agtaagagttcaatgtattatgtcttgcaatccctgaaagaagagctaccaaagattgta
gtgcaaggtatcccagaggtatctcgagctgtcattcacattgatgagcagagtggcaag
gagaaatacaaacttctggtggaaggagataacctacgagctgtcatggccacccatgga
gtcaaaggaactaagaccacttctaacaacacttatgaggtagagaaaacactagggatt
gaagctgctcgaacaaccattatcaatgagattcagtacactatggtaaaccatggtatg
agcattgacaggaggcatgttatgctgctatcagatctgatgacatacaagggtgaagtc
ctgggcattactaggtttgggctggcaaaaatgaaggaaagtgtgttaatgctggcttct
tttgaaaagactgcagaccatctgtttgatgctgcctactttgggcagaaggattctgtg
tgtggtgtttctgagtgtatcatcatgggaattccgatgaacattggaacaggactcttc
aaactgctgcacaaagcagacaaggagtcgacccctcctaggaggccccttatatttgat
aacgaatttcatattccacttatcacatag
DBGET
integrated database retrieval system
