KEGG   Campylobacter coli RM1875: YSQ_01385
Entry
YSQ_01385         CDS       T03164                                 
Name
(GenBank) 1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ccf  Campylobacter coli RM1875
Pathway
ccf00250  Alanine, aspartate and glutamate metabolism
ccf00330  Arginine and proline metabolism
ccf01100  Metabolic pathways
ccf01110  Biosynthesis of secondary metabolites
Module
ccf_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ccf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    YSQ_01385
   00330 Arginine and proline metabolism
    YSQ_01385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccf03000]
    YSQ_01385
Enzymes [BR:ccf01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     YSQ_01385
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     YSQ_01385
Transcription factors [BR:ccf03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    YSQ_01385
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AHK72654
LinkDB
Position
277519..281022
AA seq 1167 aa
MIQKSLALAEELQGKIEANISNSEKEFHAKMQKLLNNPENKVMLIELLDRSFRCKDKRAS
FELIEHTLNKYGIADFFSAFEKFLLFSFLNFGKFAPNLSVPFFVKHLREDTKAMVLDANP
SVLEPHMRKRKDQDNITLNVNLIGEEVLGEAESKYRIQKYEEALKSSYITYISIKITTIF
SQINIIDFEYSKDEVVKRLDHLYALALEEEKKQGVSKFINLDMEEFRDLELTVAAFMESV
SKFDIKAGIVLQAYIPDSYEYLKKLFAFSKERVLKGMKPIKIRFVKGANMESEETIASQR
GWELPTFYKKIDTDSNYNKMLDFVLEGDNYKYINVGIASHNIFEIAYAYTRISETGALDS
FTFEMLEGMSLQCSYELSKMHDLILYAPVCDEAHFNNAIAYLVRRLDENTSEDNFMRYFF
NLKVGDNNWNVQKELFLKSLEGIKTLDNSTHRTQDRNKAPNIVSAYESGMFNNESDTDFI
LPQNRAWAKVIRAKYENLENYDVMPVIGDLEFDKNTLNILEVKDKIKDRMIGKAYLAGEN
EIKKALEVAKNSNFKNTSFDEIHAILAKAANLMRERRGDLIGLAALEVGKTFLEIDPEVS
EAIDFTEFYPHSLKVLREQNKNTQFSPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIY
KPSSLSTLTGYMLCKCFWDAGISKDALIFLPSKGSDISKYLLVDEAVKFSILTGGEDTAY
AMLKANPTLLLSAETGGKNATIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEV
YEDEEFKKTLVDAAASMAVGNPFEFKNKLGTLADKPSAKVEKALNELAPYEEWALKPQFL
ENNPYLMTPGIKYGTKKGDFTHMNELFVPILSVMKAKDLKEAIEIVNSTGYGLTAGFESL
DEREWEYFHTHIEAGNIYINKPTTGAIVLRQPFGGVKKSAIGFGRKVGIYNYITQFLDIS
TSEADENLLNNELVKTLEKIDLGTNEENKKALNNAILMAKSYAYHYRNEFSVSKDYVNIR
GEDNLFSYTKIKNLAFRVCENDNLQDILGVIIAANILNIPLSVSYEENDKISLVKELCKA
INLNLEITNESKAQFVSRLKNFERIRYHGKVSVEDEIYQEAAKEAKIIIREKPLLNGRFE
LLFYHNEKALSVSFHRYGNLGIRALNH
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgatacaaaaatccttagctttagctgaagaattgcaaggaaaaatagaagcaaacatt
tcaaattctgaaaaagaattccatgctaaaatgcaaaagcttcttaataatcctgaaaat
aaagtcatgctgatcgaattgcttgaccgttcttttagatgtaaagataaaagagcaagt
tttgagcttatcgaacatactttaaataagtatggtatagcagatttttttagtgccttt
gagaaattcttactctttagctttttaaattttggtaaattcgcacctaatttaagtgtg
ccattttttgtaaaacatttaagagaagatactaaagctatggttttggatgcaaatcct
agtgttttagaacctcatatgcgcaaaagaaaagatcaagataatatcactttaaatgtg
aatttaattggcgaagaggttttaggcgaagcagaaagcaaataccgcattcaaaaatat
gaagaagctttaaaatcaagctatattacttatatttcgattaaaatcactactattttt
tcacaaattaatattattgactttgaatactccaaggatgaagtggttaaaagacttgat
catctttatgctttagccttagaagaagaaaaaaagcagggtgtgagtaaatttatcaat
cttgacatggaagaatttagagatttggaactaaccgttgctgcctttatggaaagtgtg
tctaaatttgatattaaagcaggtattgttttacaagcttacatacctgattcttatgag
taccttaaaaaactttttgccttttcaaaagaaagagttttaaaaggaatgaagcccatt
aaaattcgctttgtaaaaggtgcaaacatggaaagcgaagagacgattgcaagtcaaaga
ggatgggagcttcctactttttataaaaaaatagacacagatagcaattataacaaaatg
cttgattttgttttagagggagataattataaatatatcaatgtgggtatcgcaagccac
aatatctttgaaatcgcttatgcttacacacgcatcagtgagacgggagctcttgattct
ttcacttttgaaatgcttgaaggtatgagtttgcaatgttcttatgaattgtctaaaatg
catgatttaattctttatgcacctgtttgtgatgaagcgcattttaataatgctattgct
tatcttgtaagacgccttgatgaaaatacaagcgaagataatttcatgagatattttttc
aatctcaaagttggggataataactggaatgtgcaaaaagaacttttcttaaaatcttta
gaaggaattaaaacgcttgataatagcacacaccgcacccaagatagaaacaaagctcca
aatatagtaagtgcttatgaaagtggaatgtttaataacgaaagcgatacggattttatt
ttgccacaaaatagagcatgggctaaagtcataagagctaaatatgaaaatttagaaaat
tatgatgtaatgcctgtaatcggagatttggaatttgataaaaatactttaaatatttta
gaagttaaagataaaatcaaagatagaatgataggaaaagcttatttagcaggcgaaaat
gaaatcaaaaaagctcttgaagtagctaaaaattctaattttaaaaatacaagttttgat
gaaattcatgctattttagctaaggctgcaaatttgatgagagagcgtcgtggggatttg
ataggtttggctgcacttgaagtaggaaaaactttcttagaaattgatcctgaagtaagt
gaggctattgattttactgaattttatccacattctttaaaggttttaagagagcaaaat
aaaaatactcaatttagccctaaaggtataggagtaaccatagctccttggaatttccct
ataggtatttcagttggaaccatagcagcaccattagcagcaggcaatgtcgtaatttat
aagccttcttcgctttcaactttaacaggctatatgctttgtaaatgtttttgggatgca
ggaattagcaaagatgctttgattttcttgccttcaaaaggaagcgatatttctaaatat
ttacttgttgatgaagcagtgaaattctctatacttacaggtggagaagatacggcttat
gctatgcttaaagcaaatcctaccttacttttaagtgctgaaacgggtggtaaaaatgct
acgattgtttctaaatttgcagatcgtgacagcgcgattaaaaatattatccattctgct
tttagcaacagcggtcaaaaatgctcggctacttctttgcttgttttagaggaagaagtt
tatgaagatgaagaatttaaaaagactttagtagatgcagctgcttctatggctgtagga
aatccttttgaatttaaaaataaattaggcacattagcagataagcctagtgctaaagta
gaaaaagccttaaatgaactagcgccttatgaagaatgggctttaaaacctcaattttta
gaaaacaatccttatttgatgactccagggataaaatacggcaccaaaaaaggtgatttc
actcatatgaatgagctttttgtaccgattttaagtgtaatgaaagcaaaagatttaaaa
gaagctatagagatagtcaattcaacaggctatggtcttactgcaggatttgagagctta
gatgaaagagaatgggagtattttcacactcatatagaagcaggaaatatctatatcaat
aaacctacaacaggagctatagtacttcgtcagccttttggtggggtgaaaaaatctgct
ataggttttggtagaaaagtgggaatttataattacataacccagtttttagatataagc
acaagtgaagctgatgagaatttgctcaataacgaacttgttaaaactttagaaaaaata
gatcttggcacaaatgaagaaaataaaaaagctttaaacaatgctattttgatggcaaaa
tcttatgcgtatcattacagaaatgaatttagtgtttcaaaagattatgtcaatatacgc
ggcgaggataatctcttttcttatactaagattaaaaatttagcttttagagtgtgtgag
aatgataatttgcaagatattttaggagttatcattgcagccaatatcttaaatatccca
ttgagcgtgagctatgaagaaaacgataaaatttctttagtaaaagaactttgcaaagct
ataaatctaaaccttgaaatcacaaatgaaagcaaagctcaatttgtttcaagattgaag
aattttgagagaattcgctatcatggaaaagtgagtgtggaagatgaaatttatcaagaa
gcggcaaaagaagctaagattattatcagagaaaaaccattattaaatggtcgttttgag
cttttattttatcacaacgaaaaagctttaagtgtatctttccatcgctatggaaattta
ggcattagagcgttaaatcattaa

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