Cephus cinctus (wheat stem sawfly): 107272991
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Entry
107272991 CDS
T07523
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107272991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107272991
Enzymes [BR:
ccin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107272991
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107272991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
107272991
NCBI-ProteinID:
XP_015606234
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MVKEQYRETDVARKISHVSFGVDSRHNMERQAHIHVVAKNLYSQDSQRTPVQYGVLDKRM
GTCSNASNCTTCGKSLNECIGHFGYIDLELPVFHVGYFRSVICILQSICKKCSHVMLNDT
DKKHYLTRVLNPNLGYLSRKALRKQILEKAKKTSVCPNCKDLNGTVKKAGLLKIVHEKYK
AKKKIDAVVQEKLAEYNNVLEDNKQLEGILQSGLVNILNPLEVQGILERIPIYDIPLLLM
NPNCGLPKDLILTRIPVPPICIRPSVVSDLKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYMNSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIHVAKILTYPERVNPWNIELMRKLVQNGPDVHPGANF
VQQGKTQFKKFLRYGNRQKIAQDLQYGDIVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKANLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKSQASQLASCLLAGPDANMNITLPPPAILKPYKLWTGKQI
FSLILKPNDKCHIKANLKTKGKAYTSNEELCINDSYVIIRNSELLAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARIASYYLMNRGFSIGIGDVTPGQGLLKAKQELLNAGY
SKCTEYIRQMEQGRLVCQPGCTEEETLEAMILRELSVIRDHAGKACLKELHPSNSPLIMA
LSGSKGSFINISQMIACVGQQAISGHRVPNGFEDRALPHFERHSKIPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIIQVL
YGGDALDPTYMEGKDCPVDYKRVLDHVRAKSPYKNEEPLDGANVIKATSELLSSDDYSCL
SVEFKQELETFLKSVARKIARLRQNFDSSSPVTLQLERLTVSQLVEFIHICKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANPKISTPIITA
ALEIDSDPEYARQVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRIKLLKLEVDVN
SIRYSICTSRLRLNPKLVNVRGDSIITVTPSKQKCSLNYALTQLKETVPNIVIKGLPSVA
RAVIHNDDSSGKTKYKLFVEGDNMREVMATMGVLGRKTTSNNTIEVFRTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTADHL
FDAAYYGQKDAICGVSESIIMGIPVPVGTGIFKLLHKAEKDEPQKRKLIFDDPQFHKKIT
GT
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaacagtacagagaaaccgatgttgctcgtaaaatctctcatgtatccttt
ggagtggacagccgtcataatatggaacggcaggcccatatccatgttgtagccaagaat
ctgtatagtcaagatagtcagcgcactcctgttcagtatggtgtacttgataagagaatg
ggtacatgttccaatgcaagtaactgcacaacttgtgggaagtctctaaacgaatgcatt
ggtcactttggatatatagacttggaactaccagtatttcatgtgggatattttagatca
gttatttgtattttacaatcaatatgcaagaaatgttcacatgttatgctaaatgatact
gataaaaagcactacttaactcgtgtcttgaatcccaatttgggctacctaagccgtaaa
gcattaagaaaacagattctggaaaaggcaaagaaaacttcagtatgccccaattgcaaa
gatttaaatggcacagtcaaaaaagctggtttactcaagatcgtacatgaaaagtacaaa
gccaagaagaagatcgatgctgtagtacaagaaaaactagctgaatataataatgttctg
gaagacaataagcagctggaaggaattttgcaaagtggtctagttaatattttaaatcca
ttggaggtacaaggtattctagaacgaatcccaatatacgatatacctttacttcttatg
aatccaaactgcggtctaccgaaggatttaatattaactcgaattccggtaccaccaatt
tgtataaggcccagtgttgtatctgatttgaaagctggtacaaatgaggacaatctcact
atgaaattatccgaaattgtttttatcaatgacgtgatacaaaagcatagacaaagtgga
gccaaagtacagatgtataatgaggattgggaatttctgcaattacattgtgcgctttac
atgaacagtgaaatgtctggtattccattaaacatgcagccgaaaaagtctggcagaggt
ttagttcagagattgaagggaaaacagggtcgatttcgtgggaatttatccgggaagcgt
gtagatttttcaagtagaacagtcatctctccagatccaaacctccgtattgagcaggtc
ggcgtgccaattcacgtggcgaagattttgacatatccagaaagagtgaatccttggaac
atagaattgatgcgtaaattggtacagaatggaccggatgttcatcctggcgcaaatttc
gtacagcagggcaaaactcaatttaagaaatttctacgttatggtaaccgacagaagatt
gctcaagatttacagtatggggacatcgttgaaagacatcttcgggatgacgacgttgta
ttatttaatcgtcaaccatctttgcacaaacttagtataatggctcacaaagccaaagta
ttagagcatagaacatttcgatttaatgaatgtgtctgcaccccttacaatgctgatttc
gatggggatgaaatgaatttgcatttaccacaaacggaagaagccagagcagaagcgttg
gttcttatggggaacaaagctaatctagttacaccacgcaatggagaattacttattgct
gcaactcaggattttatcaccggtggttatttgcttactcaaaaagacacattcctgaat
aaatctcaagcttctcaattagccagttgtctattagctggaccggatgccaatatgaat
ataacacttccgccaccagccatactgaaaccatataagctgtggactggaaaacaaatt
tttagtttaattctaaaacccaatgataaatgtcacataaaagctaacttgaagaccaag
ggtaaagcatataccagcaacgaagaactgtgcatcaatgattcctatgttatcattcgc
aattccgagcttctggcaggatccatggataagtctacactaggttcaggttctaaacaa
aacattttctacgtccttcttcgagattggggcgaggacgcttcaactactgctatgtgg
cgtttggccaggattgctagttactacctaatgaacagaggcttctccataggtattggg
gacgtaacaccaggtcaaggattacttaaagcgaaacaggagcttctaaatgcaggctac
tccaagtgtacagagtatattcgtcaaatggaacaaggtcgtctagtttgtcaacctgga
tgtaccgaggaggagacactcgaggcgatgatcctcagggaactctcagtgatccgtgat
cacgctggtaaagcgtgtctgaaagaacttcatcctagtaacagtccactgataatggct
ttatcgggtagcaaaggcagtttcatcaatatttctcaaatgattgcctgtgtgggtcaa
caggccattagtggtcatcgtgtacccaatggattcgaagatcgtgcactgcctcatttt
gaaagacactctaagatcccagcagctaaaggctttgttgagaattcattttactcgggt
cttactccaacagaatttttctttcataccatgggtggtagagaaggtcttgttgatacg
gctgtaaaaactgcagagactggatacatgcagaggagacttgtcaagagtttagaggat
ctttgtctccattacgatatgactgttagaaattctgtaggtgacatcattcaggttcta
tacggtggcgatgcattggatcctacttatatggagggcaaagattgcccagtagattac
aaaagagttctggaccatgtgagagcaaaatcgccgtataagaacgaagaacctttagat
ggtgcaaacgtgataaaagctactagcgaacttctgagctcggatgattattcgtgtcta
agcgttgaatttaaacaggaattagaaacattcttaaaatctgtggcgcgaaaaattgca
cggttacgacaaaattttgactcaagctcaccagtaactttgcaactggaacgtctcact
gtctcgcagttggttgagtttattcatatttgtaaggaaaagtatatgagagctaaaatt
gagccaggaacagctgtaggtgcactggcggcgcaaagtattggtgaacccggtactcag
atgactttgaaaacctttcattttgctggtgtcgcttctatgaatattactcaaggtgta
ccgcgcatcaaggaaatcatcaatgccaatcctaaaattagtacccccattatcacggca
gcgctggaaatcgattctgaccctgaatatgcaaggcaagtcaagggtaggatagaaaaa
acaactctaggagaagtaactgaatatattgaagaagtttatttgccggatgactgtttc
ctgttaataaaactggatgttgatagaattaaattattgaaactggaagtggatgttaat
tcgattagatactcaatctgtacctcaaggcttagattaaatccaaaattggtgaatgtc
agaggagattcaatcatcactgtgactcccagtaaacaaaagtgtagcttaaattacgct
ctcacacaattgaaagaaacggtaccaaacattgtcattaagggtttgccatctgttgcc
agagcagttattcacaatgatgactctagtggaaaaactaaatataaactcttcgtagaa
ggtgataacatgcgagaagtaatggctacgatgggagttttagggcgcaagacaacttca
aataatactattgaggtattcagaactctgggcatcgaagctgcaagagcaacgattatg
acagaaattaaattagtcatggaaaatcatggtatgagtatcgataggcgtcatccaatg
ttggtggctgatctaatgacaagcagaggagaagtgcttggtattaccaggcagggcctg
gctaaaatgaaggaatctgtattaaatttagcttcgtttgagaaaacagctgatcatcta
ttcgatgcagcatactatgggcagaaggatgcaatttgcggtgtgtcggaatccattata
atgggtattccagttccagtgggaacaggaatcttcaaactacttcacaaagctgagaag
gatgagccacaaaagaggaaattaatattcgacgatccacaattccacaagaaaattaca
ggaacctaa
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