Coregonus clupeaformis (lake whitefish): 121531456
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Entry
121531456 CDS
T08357
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121531456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121531456
03036 Chromosome and associated proteins [BR:
cclu03036
]
121531456
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
121531456
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121531456
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
121531456
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121531456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
SET
zf-met
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
121531456
NCBI-ProteinID:
XP_045062121
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Position
21:9004770..9008558
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AA seq
514 aa
AA seq
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MRGRNLRDRPRITYTEEEVPKDDHYLYCEDCKSFFMDECELHGPPLFVPDIPAPLGASDR
ARLTLPSGLEVRTSSIPEAGLGVFNQGNIVPAGAHYGPYEGELTDKDQAMESGYSWVIYK
SRHWEDYIDAGRDTHSNWMRYVNCARSEEEQNLVAFQYRGGILYRCCKPIAVGEELLVWY
GEEYARDLGIVFDYLWDKKSSAKDVNAESSQFQIFSCSGCPFSFTSQIFLHKHIKRCHHD
EYVRLLRSGEIRSENLMSSSSSQHHGTTSGSSNPAPTRKQRETDKPRPHSCSQCGKSFTT
GRNCRTHQRTHTGEKPFYCSQCGKSFSHKGHLITHQRTHTGEKPFYCSLCGKSFSLEGNL
RTHQRTHTGEKPFYCSQCGKSFSHKGHLRTHQRTHTGEKPFHCSQCGKSFSRAGSLRTHQ
RTHTGEKPFYCSQCGKSFNHKGHLIRHQLTHTGEKPFHCSQCGKSFSLEGNLRTHQRTHT
GEKPFHCSQCGKSFSQSGSLKRHQCSKKSKEVEL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcagaaacctgagagacagaccaagaatcacttacacagaggaggaggtcccc
aaagatgaccactacctctactgtgaggactgcaagtctttcttcatggatgagtgtgag
ctccatggtccccccctcttcgtccctgacatccctgcccctctaggagcctctgacagg
gccagactcaccctgccgtccggcctggaggtcaggacatcaagcatccctgaagcagga
ctgggggtgttcaaccaaggaaacattgtgcctgcaggagcccattatggaccttatgaa
ggagagctcacagacaaggaccaagccatggagagtggatactcctgggtgatctacaag
agcagacactgggaggactacatcgatgctgggagagacactcactccaactggatgagg
tatgtgaactgtgctcgtagtgaagaagaacagaatctggtggccttccagtacagagga
gggattctgtatcgctgctgtaagcccatagctgttggcgaggagctgttggtttggtat
ggagaggagtacgccagagacctgggcattgtcttcgactacctctgggacaaaaagagc
tctgctaaagatgtgaacgctgagtcatcccagttccagatcttctcgtgctctggctgt
ccgttctccttcacctctcagatcttcctccacaagcacataaagagatgtcaccatgat
gagtatgtcaggcttttgaggagtggggagatcagatcagagaatctcatgtcctccagc
agctcacaacaccatggaaccacctcaggttcctccaacccagctcccaccaggaaacag
agagagacggacaagccacgaccacacagctgctctcagtgtgggaagagcttcactaca
gggagaaattgcagaacacaccagcgcactcacacaggagagaagccgttctactgctcc
cagtgtgggaagagtttcagtcataagggtcatctcataacacaccagcgcactcacaca
ggagagaagccgttctactgctccctgtgtgggaagagtttcagtttagagggtaatctc
agaacgcaccagcgcactcacacaggagagaagccgttctactgctcccagtgtgggaag
agtttcagtcataagggtcatctcagaacacaccagcgcactcacacaggagagaagccg
tttcactgctcccagtgtgggaagagtttcagtagagcaggtagtctcagaacacaccag
cgcactcacacaggagagaagccgttctactgctcccagtgtgggaagagtttcaatcat
aagggtcatctcatcagacaccagctcactcacacaggagagaagccgttccactgctcc
cagtgtgggaagagtttcagtttagagggtaatctcagaacacaccagcgcactcacaca
ggagagaagccgtttcactgctcccagtgtgggaagagtttcagtcagtcaggaagtcta
aagagacaccagtgttctaaaaagagtaaagaagtggaactttag
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