Coregonus clupeaformis (lake whitefish): 121531735
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Entry
121531735 CDS
T08357
Symbol
hdac10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X1
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121531735 (hdac10)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121531735 (hdac10)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121531735 (hdac10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121531735
NCBI-ProteinID:
XP_041693079
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All DBs
Position
19:5558823..5573263
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AA seq
692 aa
AA seq
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MSSGTALLYDEEMTRYKLLWVDPACKIEVPERLTVSHTALQKEGLADRCVSVPVRQATDA
EILLAHSEEYLEAVKKTPHMSLDELRNFTQQYGDVYFHPNIYHCAKLAIGATLQLVDSVM
TGKVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAAHYAKKHYNVKRVLIVDWDVHHGQG
VQFAFEDDPSVLYFSWHRYEHQGFWPNLRESDYDSVGKEKGAGFNINVPWNKVGMENSDY
LSVFFHVLLPIAYEFSPDLVFVCAGFDSAIGDPEGHMCATPDIFAHLTHLLKSLAGGKLC
AVLEGGYNLTSLAQSVCQTVQTLLGDPAPQTSELNGPCESALESIQCVRSAHKPYWACLK
HAVAPPVSEPSTKRCKLVEKEEGVQAEGGQEEEGQEEEGDGQKEEEEEVVWMKPPSRLAP
PVHTEVALPADLEVPDRCDRVRSSLAPTLEILQRLRDNFFEGSAEEEALMPLCSIIALFE
KMTKQEIRNGLALVPDVSVAMLCAVQHAGMSLTNRLLLVYLGDGEIPTYITEDGKALVVQ
ISSKEPEEQKSKYQVSVCLKKGCSDVPGLMQAVLCLLLPLAYEYDPGLVLLVQGPGSGVG
KAAWAQITSLLQGLAQGHTLALLQEGEKEAVGATAASLLGDPAPSLGPLGAPLPEDVEAM
ERLRQRLQTHWGLLQTAAAKGKEVEEKGQNQD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggaaccgctttgctttatgacgaggagatgacccgctacaaactgttatgg
gttgacccggcatgtaagatcgaggtccctgagcgtctgactgtgagtcacacagctctg
cagaaggagggtctggctgatcgctgtgtctctgtgcctgtacgccaggccaccgacgca
gagatcctactggctcacagtgaggagtacctggaggcagtaaagaagacacctcacatg
agcctggatgagctgaggaacttcacccagcagtatggggatgtctacttccacccgaac
atctaccactgtgccaagttggccatcggggccactctccagctggtggacagtgtgatg
acggggaaagtaaggaacggcatggccttggtcaggcccccaggacaccacagtcagcgc
agtgctgccaacggcttctgtgtgttcaacaatgtggccatcgctgcccactatgccaag
aaacactacaatgtcaagagggtgttaatagtggactgggatgtgcatcatggacagggg
gtgcagttcgcttttgaggatgacccaagtgtgctctacttctcctggcaccgctatgag
caccaaggcttctggcccaacctgagggaatcggactatgacagtgtgggcaaggagaag
ggtgctggctttaacatcaacgtaccctggaacaaggtggggatggagaacagtgattac
ctttctgtcttcttccatgttctcctacctatcgcatatgagttcagcccagatttggtc
tttgtgtgtgctggctttgactctgccattggtgacccagagggtcacatgtgtgccacc
ccagacatctttgcccacctgacccacctcctaaagtccctggctggggggaaactgtgt
gctgtcctggagggagggtacaacttgacctcactggcccaatcagtgtgccagaccgtc
cagaccttactcggagatcccgccccccaaacatcagaactgaacggcccatgtgagagt
gctctggagtccattcagtgtgtgagatcagctcacaagccgtactgggcctgcctcaaa
catgcagttgccccacccgtgtctgagcccagcactaaacgctgtaagctggtagagaag
gaagagggtgtgcaggctgaggggggtcaggaagaagagggtcaggaagaagagggggat
ggtcagaaagaggaggaagaggaggtggtgtggatgaagcctccgtcccggttggctcct
ccggtccacactgaagtggcgctccctgctgacctggaggtccctgacagatgtgaccgt
gtgaggtcatcactggccccaactcttgagatactgcaaagactcagggataactttttt
gaagggtcggcagaggaggaagctctcatgcctctctgcagcatcatcgcgctctttgaa
aagatgacaaaacaagagattcgtaacggtctggcgctggtgcctgatgtctccgtggcg
atgctgtgtgcagtgcagcatgctgggatgtctctcaccaaccggttgttgctggtatac
ctgggggatggggagatcccgacatacatcactgaggacgggaaagcactagtggtgcag
atcagcagtaaggagccagaggagcagaaatccaaatatcaggtttctgtgtgtctgaaa
aagggctgcagtgatgtgccagggttgatgcaggctgtgctgtgcctgctcctacctctg
gcctatgagtatgaccctgggctggtgctgctggtgcaggggccaggcagtggggtgggg
aaggcagcctgggcacagatcaccagcctactccagggcctggcacagggccacacactg
gcccttctacaggagggtgagaaggaggctgtaggggccacggcagcctctctgctgggg
gaccctgctccctctctggggcccctaggggcccctctccctgaggacgtggaggccatg
gagagactgagacagaggctgcagacacactggggactactgcagactgcagctgcaaag
gggaaagaagttgaggaaaaagggcagaaccaggactga
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