Coregonus clupeaformis (lake whitefish): 121532265
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Entry
121532265 CDS
T08357
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03020
RNA polymerase
cclu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121532265 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121532265 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121532265 (polr3b)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121532265 (polr3b)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
121532265 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
121532265
NCBI-ProteinID:
XP_041694044
LinkDB
All DBs
Position
19:complement(53138979..53169764)
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AA seq
1132 aa
AA seq
DB search
MEILGEEFGDMTPQQLAAPVNTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQPMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccttggagaggagtttggggatatgactccccagcagctcgcggctcctgtc
aacactatagaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagatcatgaaa
gcaaatgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatatc
tacgttggcatgcctgatgttgaagagagcttcaatgtaaccagaccggtgtctccacac
gagtgtcgtctcagggacatgacttactctgcacccatcacagtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctgcccatcggaaggatgcccattatgctg
cgcagctctaactgtgtcctcacggggaagacatccatggagtactccaaactcaacgag
tgccctctggacccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcatcgtggagcaggacaggaagggagcagtggga
gcctctgtgaccagttctacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggacgcttctacctgagacacaacgcactgtcagaggacgcccccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcactgag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggccc
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgtgaaggagtttaacttccgggccaagtgtatctacctagcggtgatggtgcgcagg
gtgatcctagcccaaggagagaacaaggtggacgacagagactactatggcaacaagcgt
ctggagttggctggacagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaagatctcagaccagatcatccccaagcagcgggcagcccagttcgac
attgtcaaacacatgcgccaggatcagatcaccaacggcatggtcaacgccatctccaca
gggaactggtccctgaagaggtttaagatggaccgtcagggcgtgacccaggtgctgtcc
cgtctctccttcatctcggctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcggaccccgctccctacagccctcccagtggggcatgctgtgcccc
tccgacaccccggagggagaggcctgtggtctggtgaagaacctggccctgatgacccac
atcaccacagacatggaggacggccccatcgtcaagctggccttcaacctaggagtggag
gacgtcaacctgctgtgtggagaggagctctcctaccccagtgtcttcctggtcttcctc
aatggtaacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactg
atgcgacgggccggatttatcaacgagtttgtgtccatctccaccaacctaaccgaccgc
tgtgtctacatctcctcagacggaggacgcctctgcagaccgtacatcattgtgaagaaa
ggacagccgatggtcaagaacaaacacatcgaggagttgacccagggatacagaaccttt
gaggatttcctccatgagagcctagtggagtacctggatgtcaacgaggagaatgactgt
cagatcgccctctatgagcacatgattaataaggacactactcacttggagattgagccc
ttcacactactaggggtctgtgctggcctgatcccctacccacatcacaaccagtccccc
aggaacacataccagtgtgctatgggcaagcaggccatgggtacgattggctacaaccag
aggaaccgtatagacactctgatgtacctgctgggctaccctcagaagcccatggtgaag
actaggaccatagagctgatagactttgagaagctgcctgcgggccagaacgccacagtg
gctgtgatgagttacagcggctacgacatagaggacgctctgatcctcaacaaggcctct
ctagacagaggattcggaaggtgcctggtctacaagaacgccaagtgcacgttgaggcgc
tacaccaaccagacctttgacaaggtgatgggtcccatgctggacgcggccacacgcaag
cccatctggaggcacagtatcctggacgccgacggcatctgctgccctggtgagaaggtg
gagaataagcaggtgctggtgaacaagtccatgcccactgtcacccagacaccactggag
ggcagtgcccagccaggacagccccagtacagagacgtgcccatcagttacaagggctcc
acagactcatacattgaaaaggtgatgatctcctccaacgcagacgatgctttcctcatc
aagatcctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcac
ggacagaaaggtgtgtgtggcctgatcgttcctcaggaggacatgcccttctgtgactcg
ggtatctgccctgacatcatcatgaacccgcacggctacccctccagaatgacggtgggg
aagctgattgagctgctggctggtaaagcgggggtgatggacgggaggttccactatggc
acggccttcgggggcagcaaggtaaaggacgtgtgcgaggacctgatccgctatgggtac
aactaccagggcaaggactacgtcacctcgggcatcaccggagagccaattgaggcctac
atctactttggaccagtgtattatcagaagctaaagcacatggtgctggacaagatgcac
gccagagcccgcggccccagagctgtgctcaccagacagcccacggaggggcgctctaga
gacggaggcctacgtctgggggagatggagcgtgactgtctgattggctatggggccagc
atgttgctgctggagcgcctcatgatctccagcgacgccttcgaggtggacgtgtgcggt
cagtgtggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtg
tcctcgttgcggataccctacgcctgcaaactgctcttccaggagctgcagtccatgaac
atcatcccccgcctcaaactagcacgctacaacgagtaa
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