Coregonus clupeaformis (lake whitefish): 121535155
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Entry
121535155 CDS
T08357
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121535155
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121535155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121535155
NCBI-ProteinID:
XP_041697861
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Position
21:complement(26457416..26489768)
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AA seq
492 aa
AA seq
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MTALAGGIPRMMRPNPHQNYPRGGYSLEVSTPLGQGRVNQLGGMFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTTTPDVDKKIEE
YKRDNPGMFSWEIRDKLLKDGICDRNNIPSVSSISRIMRCKFGGVGGEDEEDDDEIEKRE
LEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEELERAF
ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSA
MSSLQPYQLSDTPYPPTSISQTVSEQHSTVHRPQPLPPTSVHQGGLGSSAGAQEGSSAYC
LSSGRHGFSGYSDSFVPPPGHSNPVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFALSP
LTGGMEPGGGMAASCHGSQRGLEGLPGLTSMPTLPNSQSYCPPTYSSPAYAMDHHPSYQY
GQYGQSKVPFII
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactagcggggggcataccgaggatgatgcgcccgaacccacaccaaaactac
ccgcggggaggctactcactggaagtctctaccccgttaggccagggccgggtgaaccag
ctcggtgggatgtttatcaacggcagacccctgcccaaccacatccgccacaagatcgtg
gagatggcacaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccat
ggctgcgtgtcgaaaatcttgtgcaggtaccaggagacaggctccatcaggcctggggcc
atcggaggcagcaaacccaagcagacaacaaccccagatgtggataagaagatcgaggaa
tacaagagagacaacccgggcatgttcagctgggaaattagggataaattactcaaagac
gggatctgtgacagaaacaacatcccctcagtgagttcaatcagccgtatcatgcgttgt
aaattcgggggagttggaggagaagacgaggaggacgatgatgaaatagagaagagggaa
ttggaagagaacgaaagacgagcgaaacacagcatcgatggcatcctcggggatagatct
agccactcagacgagggttcggatgtggactctgagccgggcctgccactaaagaggaaa
cagcgtcgcagtaggaccaccttctcagccgagcagctggaggagctggagagagccttt
gaacgaacacactaccctgatatatacaccagagaagagcttgctcagagggccaaactc
acagaagccagagttcaggtgtggttcagcaacaggagagccaggtggaggaaacaggca
ggagccaatcagctaatggcatttaatcacctgatccctggcggtttcccgccttcggcc
atgtcgagcttgcagccctatcagctgtcagacaccccctaccctccgacctccatctca
caaacagtgtcagagcagcacagtacggtccacaggcctcagcctctccctcctacctca
gtgcaccagggtgggcttggctcctcagcgggggcccaggaagggagttcggcctactgc
ctgtcctccggacgccacggcttctcaggctactcagacagctttgtgcccccgcctggc
cactccaacccagtcaaccccagcatcagcaacggcctctcaccacaggtgatggggctg
ttgaacccaggaggagtgccccaccagcccagccaccaaagtgactttgccctctctccc
ctgaccggtgggatggagcccgggggtggcatggcagccagctgccacggctcccagcgg
ggcctggagggtctgccaggcctgaccagcatgcccaccctgcccaactcccagtcctac
tgcccgcccacctacagctcgccagcctacgctatggaccaccacccctcctaccagtac
ggacagtatggacagagcaaggtgcctttcattatctga
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