Coregonus clupeaformis (lake whitefish): 121536725
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Entry
121536725 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536725
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121536725
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
121536725
NCBI-ProteinID:
XP_041700117
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Position
23:complement(23911763..23962196)
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AA seq
1006 aa
AA seq
DB search
MLSNAGVYAVKKRKKPVQKTKKTPAPDVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVRS
RLDKLSVLRLSVGYLKVKSFFKATMKKSSDLFPSGNGLNINGMEATTFSKGDLLLKALNG
FVLVVTAEGHVFYASPTIQDYLGFHQSDVVHQSVFELIHTDDRAMFRRQLHFALNPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHAQSMQGEDGTRSQPNLGLFTIATPVQTPSILEIRSKTIFFQTKHKLDFTPMGVDA
RGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMMKTGESGLTTFRLLQKTGCWVW
VQANARLVYKGGRPDFIIARQRALLNSEGEEHLRQRKMQLPFSFTTGEALLYETGPTLDA
TEFQTNSPKIRKVESLDPESLLGSLLKQDESVYTQPQEPQLPIDQAFMDSRTLTNVACNS
WQSSMEPQGPDGHDDGDGPSEVKQEGAVLAMIDALEKMARDGDLCAALQGLDVDAVELME
WESALLRLSQDSNGTGGRDTSLELDDIMTNDIFSYVEEALFKESSEGSGNQPNCSIMVNN
NPNLNLFTEVFNNNNQGGPFTGVVSPTGVGQCKPGLHDSRSFIHNGSLLNGLNVQVTGNG
PDGLAGQNQAGPHQVFNSTQRLSHFGPQIPQMDLNIPTLQQLQLNDIFTPSLELPELSIP
HSSGQKGSVTFGTSMTGSCAQAPNNHMGSPQGITGQVHSNQSPTQFFTHNGLPATMAPNG
PQQISVPQSNHLAPSLVDAWASMIPSNGFVSPQIESSNLNLSNPLPTACIQGNTAPFQSL
KIQRVGLWPHNQQQQQLPPPASTMQNGLMPNGHKFILDCHSQAIETQRVPLTGLWPQNPN
GLYHQPQQGGLANGQPAPSSSCMFENISPPLPNGNSHVNGIGLDPTLSVCQRRKVDPQDR
SPPQGSCYFQWGPSEPVVGTSAIIQDNTSTSPPSRPLVWPVGPHHP
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacgctggagtctatgctgtcaaaaagcggaagaagccggttcagaaaacc
aagaaaacccctgctccagatgtggtcaagtctaacccttccaaacgccaccgggatcgg
ctgaacggggagctggacaggctgacgggcctcctaccattccctgaggatgtgcgctct
cgcctggacaaactctccgtgctccgcctcagcgtcgggtacctgaaggtcaagagcttc
ttcaaagcaaccatgaagaaaagcagtgacctgtttcccagtgggaatgggctgaacatt
aatgggatggaagccacaaccttctccaagggggacctactactaaaggctctgaacggc
tttgtgctggtggtcacagctgaaggacatgtgttctatgcctctcctactatccaagac
tacctgggcttccatcagtcagatgtggtccaccagagtgtgtttgagctgatccacaca
gacgacagagcaatgttcagacgacagcttcacttcgccctcaaccccaagccctttgac
ccagagcagggaggagacggcatggcaagcagcagtgacatcaccaggaacattgtgacc
tacaaccctgagcagctccccccagagaactcctccttcctggagaggaactttgtgtgt
cgcttccgctgcctcctggacaactcctctggcttcctggctctgaacttccaggggcgt
ctgaagttcctccatgcccagagcatgcagggggaagacgggacacgcagccagcccaac
ctgggcctgttcaccatcgccacccctgtccagaccccgtccattttggagatcagatcc
aagacaattttcttccagaccaaacacaagctcgacttcacccccatgggtgttgatgcc
agggggaaggttgtcctgggctactcagagatggagttgtgtatgagaggctctggatat
cagttcatccacgctgctgatatgatgtactgcgcagacaaccatgtcagaatgatgaag
acaggagagagtggtctgaccacattcagactgcttcagaagaccgggtgctgggtctgg
gtccaggccaatgccaggctcgtctacaaaggaggaaggcctgacttcatcatcgcacgc
cagagagctttactgaattccgagggagaggagcatctacgccagaggaagatgcagctg
cccttcagcttcaccaccggggaggccctgctgtacgagaccggccccactctggacgcc
actgagttccaaaccaactcccccaaaatccgcaaggtagagtctctggaccccgagtct
ctactgggctccttactgaagcaggacgagtccgtctacacccagccccaggagcctcag
ctacccatagaccaggcattcatggacagccgaacgctcaccaacgtggcctgtaactca
tggcagagtagcatggagccccaggggcccgatgggcatgatgatggtgatggccccagt
gaggtgaagcaagagggggcggtgctggccatgatcgacgccctggagaagatggcgcgg
gacggggacctgtgtgcggcgctgcaggggctagacgtggatgcggtcgagctgatggag
tgggagagcgccctcctcaggctgagccaggactccaacgggaccgggggcagggatacc
tccctggagctggatgacatcatgaccaacgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagcgaggggagcggtaaccagcccaactgctccattatggtcaacaac
aaccctaaccttaacctgttcacagaggtgtttaacaacaacaaccagggtgggccattc
acaggagtggtcagccctacaggtgtcggacagtgcaagcccggattgcatgacagccgc
agctttatccataatggctccctattgaatggtctaaatgttcaggtaacaggcaacgga
ccagatggtttggcaggacagaaccaggcaggaccacaccaggtgttcaacagcacccag
aggctctcccacttcggcccccagatccctcagatggacctgaacatccccaccctgcag
cagctacagctcaacgacatcttcaccccctctctggagctccccgagctcagtatccca
cacagctcaggccagaaagggtctgtcacgtttggcaccagcatgactggatcctgtgct
caggcaccaaacaaccacatgggaagccctcagggtatcactggccaggtccactctaac
cagtcacctacacagtttttcactcataatggcttgccagctacaatggcaccaaacgga
ccacagcagatctctgttccacagtccaaccatttagcacctagtctggtggatgcctgg
gcatccatgattcccagtaatggctttgtttcaccccagattgaatctagcaatctcaat
ctatctaatccccttccgactgcttgcattcagggaaacactgcaccatttcagtcactc
aaaatccagagagtggggttgtggccccataaccagcagcagcagcagctgccacccccc
gccagcacaatgcagaatggattaatgccgaatggacacaaattcatccttgactgtcac
agtcaagccatagagacccaaagagtccccctcacaggcctttggccacagaaccccaac
ggactgtatcaccaaccccagcaggggggactggccaatggccagcctgctccatccagc
agctgcatgtttgagaacatctcaccccccctccctaatggaaacagccacgtgaatggc
atcgggctggaccccacgttgtctgtatgccagaggaggaaagtggacccccaggaccgg
agtcctccacagggttcctgctacttccagtggggccccagtgagccagtggtgggtacg
tcagccatcatccaggacaacaccagcaccagccccccgtctcgcccgctggtgtggcca
gtagggcctcaccacccctga
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