Coregonus clupeaformis (lake whitefish): 121539579
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Entry
121539579 CDS
T08357
Name
(RefSeq) gephyrin isoform X1
KO
K15376
gephyrin [EC:
2.10.1.1
2.7.7.75
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00790
Folate biosynthesis
cclu01100
Metabolic pathways
cclu01240
Biosynthesis of cofactors
Module
cclu_M00880
Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
121539579
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.75 molybdopterin adenylyltransferase
121539579
2.10 Transferring molybdenum- or tungsten-containing groups
2.10.1 Molybdenumtransferases or tungstentransferases with sulfide groups as acceptors
2.10.1.1 molybdopterin molybdotransferase
121539579
BRITE hierarchy
Motif
Pfam:
MoCF_biosynth
MoeA_N
MoeA_C
Tubulin-binding
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
121539579
NCBI-ProteinID:
XP_041704112
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All DBs
Position
20:complement(59791523..59901994)
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AA seq
888 aa
AA seq
DB search
MASEGMILTNHDHQIRVGILTVSDSCFRNLAEDRSGVNLKDLVHDPSLLGGIISSYKIVP
DEIDEIKETLVDWCDEKELNLILTTGGTGFAPRDVTPEVHGDPKVCVCVHATREVIEREA
PGMALAMLMGSLQVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDL
LRDAVVKVKEVHDALEDLPSPPPPLSPPLTLNSVACTQTEEKGVQCEDDEDEKTKDIGVA
STEDHHHHTHSHHRHSHSHGHNSHITAAAIAAKKGKPQQHHNHAVVMAKGSQYLPGLVSD
LPPAPRNFTCFCSGDQPVTIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASC
PTPKARLPSCSSTYSVSEAARREFRAHLDEVITLQSRYSTLDQLHSRLEGLNEDRRGHSR
TYDSRVQSRCGSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTE
IINYRAVPPDPDALHSTLSIDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRF
IIGESQAGQQPTHTVMPGQVMRVTTGAPIPCGADAVVQVEDTELLRESEDGTEELEVRIL
VQARPGQDIRPIGHDIKRGECVLSKGTHMGPSEIGLLATVGVTEVEVQKFPVVAVMSTGN
ELLNPEDDLHPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVI
ITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATVDIDGARKLIFALPGNP
VSAVVTCNLFVIPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPW
AQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaagggatgattttaaccaaccacgaccaccaaattcgagtcggaattcta
acggtgagtgacagctgcttcaggaacctggctgaggaccgcagtggagtaaacctcaaa
gatctggtccacgacccgtcactcctcggaggcatcatatcttcctacaaaatagtccca
gatgagatcgacgagattaaggagacattggtggactggtgtgatgagaaggagctgaac
ctgattctgaccaccgggggaacaggcttcgcccctcgtgatgtcactcccgaggtacat
ggggaccccaaagtttgtgtttgtgtccatgccaccagagaggtgatcgagcgcgaggcc
ccagggatggccctggctatgctgatgggctccctccaggtcacacctctgggcatgctc
tccaggcctgtctgtggaataagaggcaaaaccctcattatcaacctacctggcagcaag
aagggctcacaggagtgtttccagttcatcctgcccgctctgccccacgccattgacctg
ctgcgtgacgcggtggtgaaggtgaaggaggttcacgatgccctggaggacctgccctca
cccccaccgcccctctccccgcccctcaccctcaacagcgtcgcctgcacccagacagag
gaaaagggtgtgcagtgcgaggatgatgaagatgagaagacgaaggacattggggtggcg
tccaccgaggaccaccaccaccacacccactcccaccaccgccattcccactcccacgga
cacaactcgcacatcaccgccgccgccatcgctgccaagaaggggaagccccagcagcac
cataaccatgctgttgtcatggcaaaaggtagccagtatctacctggcctggtatctgac
ctaccccccgccccacgtaatttcacctgcttctgctctggagaccagccggtaacgatc
ccagacagcatcatctccaggggtgtgcaggttcttcctagagacacagcctctctgagc
accacgccctctgagtcgccccgcgcacaggccacctcgcgcctctccaccgcctcctgc
cccacacccaaagcccggctcccctcctgctcatccacttatagtgtctctgaggccgca
cggagagagttcagggctcacctggatgaggtcatcacgctccagtctaggtactctacc
ttggaccagctccactctaggttggaggggctcaacgaggaccgcagaggccatagcagg
acctacgactcgcgagttcaatcacggtgtggcagcaaagagaacatcctgagagctagt
cacagtgcggtggacatcaccaaggtggctcgccggcaccgcatgtctcccttccccctc
acctccatggacaaggccttcatcactgtactggagatgacccccgtgctcggcactgag
atcatcaactacagagctgttccacctgacccagatgctctccattccaccctgtctatc
gatgggatgggtcgagtcttagcgcaggacgtctatgccaaagacaacctgcctccattc
cctgcatcagtcaaagatggctacgccgtgcgagcggctgatggtcctggagatcgcttc
atcattggagagtcacaggcaggacagcagcccacccacacagtgatgccgggccaggtg
atgagggtgacaacgggggctcctatcccctgtggggcggatgctgtggtgcaggtggag
gatactgaactgctccgagagtctgaggacggcacagaagagctggaggtgcggatcttg
gtacaggcacggcctggacaggacatcaggcctataggtcatgatataaagcgtggggag
tgtgtcctgtccaagggaacccacatgggcccctctgagatcggcctgctggccaccgta
ggagtcactgaggtggaggtgcagaagttccctgtggtggctgtcatgtccactggcaac
gagctgttgaacccagaggatgacctgcacccagggaagatcagggacagtaacagatct
acactgctggccaccattcaggagcacggataccctaccatcaacctgggcatcgtggga
gacaacccagatgacctcctcaacgccctgaacgagggcatcagccgtgctgatgtcatc
atcacctcagggggcgtgtccatgggagagaaggactacctgaagcaggtgctggacatt
gacctccatgcccagatccactttggacgggtctttatgaagccaggtcttcccaccacg
ttcgccactgtagacattgacggggcacggaaactgatatttgctctaccaggtaaccca
gtgtctgctgtcgtcacctgtaacctcttcgtcatccctgctctgaggaagatgcagggg
atcctggaccctcggcccaccattatcaaagccaggctgtcctgtgatgtaaagttggac
cctcgtccagagtaccaccgctgcatcctgacatggcaccaccaggagcctctgccatgg
gcacagagcacaggaaatcagatgagtagtcgactgatgagcatgagaagtgccaatggg
ctgctgatgttgcctcctaaaacagagcaatacgtggagctgcataaaggagaggttgtg
gatgtgatggtcataggacgactatga
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