Coregonus clupeaformis (lake whitefish): 121541251
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Entry
121541251 CDS
T08357
Symbol
casr
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04612
calcium-sensing receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121541251 (casr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121541251 (casr)
G protein-coupled receptors [BR:
cclu04030
]
Metabotropic glutamate receptor family
Calcium-sensing
121541251 (casr)
BRITE hierarchy
Motif
Pfam:
ANF_receptor
7tm_3
NCD3G
Peripla_BP_6
Ephrin_rec_like
Herpes_gp350_A
Motif
Other DBs
NCBI-GeneID:
121541251
NCBI-ProteinID:
XP_041706167
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All DBs
Position
27:38404379..38409315
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AA seq
941 aa
AA seq
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MRFYLYYLVFLGSSSVISTYGPHQRAQKTGDILLGGLFPMHFGVTSKDQDLAARPESTEC
VRYNFRGFRWLQAMIFAIEEINNSSTLLPNITLGYRIFDTCNTVSKALEATLSFVAQNKI
DSLNLDEFCNCTDHIPSTIAVVGASGSAVSTAVANLLGLFYIPQISYASSSRLLSNKNQF
KSFMRTIPTDEHQATAMADIIDYFQWNWVIAVASDDEYGRPGIEKFEKEMEERDICIHLS
ELISQYFEEWQIQGLVDRIENSSAKVIVVFASGPDIEPLIKEMVRRNITDRIWLASEAWA
TTSLIAKPEYLDVVVGTIGFALRAGEIPGFKDFLQEVTPKKSSHNEFVREFWEETFNCYL
EDSQRLKDSENGSTSFRPLCTGEEDIMGAETPYLDYTHFRISYNVYVAVHSIAQALQDIL
TCIPGRGLFSNNSCADIKKIEAWQVLKQLRHLNFSNSMGEKVHFDENADPSGNYTIINWH
RSPEDGSVVFEEVGFYNMRAKRGVQLFIDNTKILWNGYNTEVPFSNCSEDCEPGTRKGII
ESMPTCCFECTECSEGEYSDHKDASVCTKCPNDSWSNENHTSCFLKEIEFLSWTEPFGIA
LALFSVLGVFLTAFVMGVFIRFRNTPIVKATNRELSYLLLFSLICCFSSSLIFIGEPQDW
TCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSLHRKWWGLNLQFLLVFLFTFVQ
VMICVVWLYNAPPASYRNHDIDEIIFITCNEGSMMALGFLIGYTCLLAAICFFFAFKSRK
LPENFTEAKFITFSMLIFFIVWISFIPAYFSTYGKFVSAVEVIAILASSFGLLACIFFNK
VYIILFKPSRNTIEEVRCSTAAHSFKVAAKATLRHSSASRKRSSSVGGSCASTPSSSISL
KTNDNDSPSGQQRIHKPRVSFGSGTVTLSLSFEESRKNSMK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagattttacctgtattacctggtgtttttgggctccagttctgtcatctccacctat
gggcctcatcagagagcacagaagactggggatattctactgggcgggctgtttccaatg
cactttggtgttacctccaaagaccaagacctggcagcgcggccagaatccacagagtgt
gttaggtacaatttccggggattccgttggcttcaggccatgatttttgcaatagaggag
atcaacaacagcagtaccctcctgcccaacatcacactgggctacaggatctttgacacc
tgcaacactgtgtccaaggccctggaggctaccctcagtttcgtagcacagaataagatt
gactctctgaacttggatgaattctgtaactgcacagatcacatcccatcgactatagca
gtggtgggggcatctgggtcagcagtctccactgctgttgccaatctgttgggcctcttc
tacattccacagatcagctatgcctcttccagtcgcctgctgagcaacaagaaccagttc
aaatccttcatgaggaccattcccacagatgagcaccaggccactgccatggcagatatc
atcgactacttccaatggaactgggtcattgcagtagcgtctgatgatgagtatggacgt
ccggggattgaaaagtttgagaaagagatggaagaacgagacatttgtatccatctgagt
gagctgatctctcagtactttgaggagtggcaaatccaagggctggttgaccgtattgag
aactcctcggctaaagttatagtcgttttcgccagtgggcctgacattgagcctcttatc
aaagagatggtcagacggaacatcacagaccgcatctggttggccagcgaggcttgggca
accacctccctcatcgctaaaccagagtaccttgatgttgtagttgggaccattggcttt
gctctcagagcaggtgaaatacctggcttcaaggacttcttacaagaggtcacaccaaag
aaatccagccacaatgagtttgtcagggagttttgggaggagacttttaactgctatctg
gaagacagccagagactgaaagatagtgagaatgggagcaccagtttcagacccttgtgt
actggagaggaggacattatgggtgcagagaccccatacctggattacactcattttcgt
atttcctataatgtgtatgttgcagttcactccattgcacaggccctgcaggacattctc
acctgcattcctggacgtggtcttttttccaacaactcatgtgcagatataaagaaaata
gaagcatggcaggttctcaagcagctcagacatttaaacttctcaaacagtatgggagaa
aaggtgcactttgatgagaatgctgatccatcaggaaactacaccattatcaattggcac
cggtctcctgaggatggctctgttgtgtttgaagaggtcggcttctacaacatgcgagct
aagagaggagtacaacttttcattgataacacaaagattctgtggaatggatataatact
gaggtgccattctctaactgtagtgaagattgtgaaccaggcaccagaaaggggatcata
gaaagcatgccaacttgttgctttgaatgcacagaatgctcagaaggagagtacagtgat
cacaaagatgccagtgtttgtaccaagtgtcccaatgactcatggtctaatgagaaccac
acatcctgtttcctgaaggagatagagtttctgtcttggacagagccctttgggattgcc
ttggcattattctctgtgctgggggtattcttgacagcattcgtgatgggagtgtttatc
agatttcgcaacaccccaattgttaaggccacaaacagagagctgtcctacctcctcctg
ttctcactcatctgctgtttctccagctccctcatcttcattggtgaaccccaggactgg
acatgccgtctacgccagcctgcattcgggatcagttttgttctctgcatatcctgcatc
ctggtcaaaactaaccgagtacttctagtgtttgaagccaagatccccaccagtctccat
cgtaagtggtgggggctaaacttacagttcctgttggtgttcctgttcacatttgtgcaa
gtgatgatatgtgtggtctggctttacaatgctcctccggcgagctacaggaaccatgac
attgatgagataattttcattacctgcaatgagggctctatgatggcgctaggcttccta
attgggtacacatgcctgctggcagccatatgcttcttctttgcatttaaatcacgcaaa
ctgccagagaactttaccgaggctaagttcatcaccttcagcatgctcatcttcttcatc
gtctggatctctttcatccctgcctacttcagtacttacggaaagtttgtgtcggctgtg
gaggtcattgccatactagcctccagctttggactgctggcctgtattttcttcaataag
gtctacatcatcctcttcaaaccgtccaggaacactatagaggaggttcgctgtagcact
gcggcccattctttcaaagtggcagccaaggccactctgagacacagctcagcctccagg
aagaggtccagcagtgtggggggatcctgcgcctcaactccctcctcatccatcagcctc
aagaccaatgacaatgactccccatcaggtcagcagagaatccataagccaagagtaagc
tttgggagtggaacagttactctgtccttgagctttgaggagtccagaaagaattctatg
aaatag
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