Coregonus clupeaformis (lake whitefish): 121542611
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Entry
121542611 CDS
T08357
Symbol
setd2
Name
(RefSeq) histone-lysine N-methyltransferase SETD2 isoform X1
KO
K11423
[histone H3]-lysine36 N-trimethyltransferase [EC:
2.1.1.359
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121542611 (setd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542611 (setd2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.359 [histone H3]-lysine36 N-trimethyltransferase
121542611 (setd2)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121542611 (setd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
SRI
WW
AWS
Motif
Other DBs
NCBI-GeneID:
121542611
NCBI-ProteinID:
XP_041707982
LinkDB
All DBs
Position
17:25764439..25803805
Genome browser
AA seq
2964 aa
AA seq
DB search
MDALVNSEIREEGGDTSVKVEGLTKAAILKGLSPRVMLSSHLLPKGTKRKVNLDDQGRQK
VSFSFSLTKKPLQNLFLVPPSQEKSFAELPSVLSPTTSHSQDRAGQHTESKNEQMQPPLS
VPTPVAETLAPQTAVSSVPKPKVDLGKMHFKKQILSVSVIEKSPITSVVLQDPPPSEQQV
LMKSSGEIETVTPTQTSQSQNSLQNMDNECPSENALTHVSDVKPDLSLKELTDSSHVGKV
DVNSSSVTEQQDASENIPIRSRSDSTLPGSESDADSVQTSSSHKSGEPKATAKSESRSKD
AKRISSSRSKLEETEKSSHHARSEKDERTCSYSKSDRESKSDRELRSTADRESKYDRESK
HTPSRSSRSDKDRKRTKSRSRSRSRGPRTSSRPETRSRSERSRSERGSGSRSDRSYHDSE
RRSGGHRSSPYRERRGSSRSQTDSSRVRGDSSDSEDDHRRTRTRTSDSSRSSTHSSLQRD
SKSSSSRSKSERDSKYIDSPYFSEIDKRTQSSKSERASKRTVDSYSLQKCSPEGESNHRK
SNTHYKQDISVRSTHSSPHALSQTSDKSLQKSSSSEFEVAHKGKSQSQGSDRSSGSEGAW
TSSTSKSDSKQMSASKSSLKSNRQSNDTFHSPNKIQTHETPSGAHSQSKNDKAGADSQLA
DTCQREDVGNMDDITSQDKDLQKPTLSLPSNCDPTHRLREPALDLVNENINHCIEVQNVS
AATLPNTSSGDQLCEKFALGDIDNVNKSICSEQKEDSQRVDPQMGSTEKPDDVANSSFSC
SNEQVIPSLDKTVFQGSVGSKSSPSTVDVSVRDHPKENTKPENTFYSSRNVNIKMQSCTS
VPLKSEPSSPEPQQFPNKTEQQNSSLRKNRGKTKRSRWDIVGQDTSDSDNPQKWPSQESK
PAVKKVISVKRIEFSKDVSQEDPSLIKGKLKWEAELHSKTIKQEIVIAQEHSSVPISLRK
DQSESANPTAQPGTCGTSNDHSDIKPHISQMDGEPSLLNNTSHVDNARREQGRNGDGNEE
KPKDGTHKSKLVKRRVSSQDGVGQSEDSDSDDSESDSDCGAAVKRMHSVVVVPKNSTLTL
SDTTDKPVSPCTPSTSPGRQQHANRASGQEGDLDRKEITSRVSPQQRHRGFPTMCERTRQ
ASNACVDGSLSLHDIMVYQSQSNMVDSTSQLEGSNATDAQPYKDPYSSAHERPKIGAATV
SQVAAHSLETSFRQSDTGHPQHYESGRGGGMLSRYQHGDFASSDDFNSSLGSLGWDFTQP
EQPSSTYQQPDSSYGASQQHPNTQQPGNSSLGQVYRADNGACWTQLPTTTQPTCRPVYLH
VPATHYQEPVGQVHPDSLTNDCDEDSEGKPAGLSRLAGECNGPNLPGSLAFVQAHEISSN
CRGSVNATPESIAIVEPPRDKDNSRPHRGRGPPKKRRPEMESDSDSEAEPGLASKRERLA
ERELPKVSSKDSRETPGQAEVQRPLLSLRDFRDASNWREMARSKKMPPYFDLIEENLYLT
ERKKNKSHRDIKRMQCECSMLSREERSRGMMACGEDCLNRLLMIECSSRCLNTGYCSNRR
FQMKQHADFEVILTEEKGWGLRAARDLMPNTFVLEYCGEVLDHKEFKMRVKKYASMKNIH
YYFMALKNNEIIDATLKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTSRTVTAGTELT
FDYQFQRYGKEAQKCFCGAPSCRGFLGGENRVSVRAAAGKMKKERPRKKDTSVSNALTTV
DEELEALLENGEGLYDEKEVVSLCRLMVRVETMEQKLICLKLIQDTQSPSCLKQFLDHHG
LSLLWIFMVELSEAKGNSVNNIKLQFQIMKTLSVLPISTKNMLEESHVLSLIQRWAQTHT
HSLPQPPGADQDGYSSENTSRAQTPLNTPDGSSASVAKLGPELDSDTPKLGPELDSDTPK
RAVYRRLKISENSLDSAMSDASKASDGKEEEEEDEEEMEDEEASRSEPPVESSKRAQTEP
VVEAQAQTEPVVEAQADPVVEAQAEPVVEAQAEPVVEAQAEPVVEAQAEPVVEAQAEPVV
EAQAEPVVEAQAEPVVEAQAEPVVEAQAQAEPVVEAQAQAEPVVEAQAQAEPVVEAQAQA
EPVVEAQAQAEPVVEAQTPTTEEPTEEPVTELKETPEVVVEAMEVTEPKAESQDAKDQEE
GVKDEWSEGQKENGEEEHASQSMEESEVVAGEQANMEVQVQESSQIEPVQTEVTETPSEE
HPAGEKEETTTAETGTEDAEKAPGSQEQPGQVAPEVPPEVAPGTEDAAQVVTPASEAPPP
PSPVVPVEPTAVGTPSQDEEEGVSDVESERSQEPQLRAVDIGDMAARLLDSWRDLKEVYR
IPKKSQVEKETHDRSRDRDAALAPARTPSGSRERERERDKERDRERDRDRDRDRERDRER
DRDWERDRERDRERDWDRDSEKTPRSTERRRRRASTSPPPSAYERSSRRNEDRFDLANSS
KKSRTITKERTKLSTEERRKLFEQEVAQREAQKQQQQLQQQQQQQQQQQQQQQQLQTLAY
DAALTYTTSPAGFLHYPPGYPLQTYVDPINPNAGKVLLPTPPVEPLVPATLAFEQTPPQA
LITELGMASPSSTSQPPPVSNLSSLPQHIQQPTAPLELHRGTPQQYTLQPSVAGQDPGVA
VLSVPAVSAPPQVSAGQGSYTTLWDPTTQQAVTVQTQIAPQYQVVPAPPPTQTAIYYQGQ
PCQTIYSIPTAYPQANTPVLQAYSDPAASYLHGQPVYTGHQQGVVVQQGGTVTTIVTSQT
VQQELPNTVLVPNSMIDLPPPSPPKPKTIVLPPSWKVARDGEGKIYYYHVITRQTQWDPP
SSWDGASEDAHSLDHEAEMDLGTPTYDENPSKFSTKTAEADTSSELAKRSKETFRKEMSQ
FIVTCLNPFRKPDCKLGRIINTEDFKHLARKLTHGVMNKELKSCKNPEDLECNENVKHKT
KEYIKKYMQKFGSIYRPKEDTELD
NT seq
8895 nt
NT seq
+upstream
nt +downstream
nt
atggatgctctggtgaactcagagatcagggaagagggaggagatacctcagtcaaggtt
gagggcctcaccaaggcagctatactcaaaggcctctctcctcgagtgatgttgtccagc
catctcctgcctaaaggaaccaagaggaaggtgaacctggatgaccagggtcgccagaaa
gtgtccttcagcttctctctcacaaagaaacctctgcagaacttattcctggtgcctccc
agtcaggaaaaatcttttgctgaacttccctctgtcctgtcacctacaacctcacactct
caggacagagcagggcagcatacggaaagtaaaaatgagcaaatgcagccacccttgtca
gtgcccacaccagtagcagagacccttgcacctcagacggcggtctcctcagtccccaaa
cctaaagtggacttgggaaagatgcacttcaagaaacagattctcagtgtatctgttatt
gaaaagagtcccataaccagcgttgtcttacaggatccacccccttccgagcaacaggtt
ttaatgaaatcttcaggtgaaattgaaactgtcaccccaacacaaacatcccagtctcag
aacagtcttcagaacatggacaatgagtgcccctctgagaatgctctcactcatgtatct
gatgtgaagccggacctcagtctcaaggagctgactgattcctcccacgtagggaaagtg
gatgtaaacagttccagtgtaacagagcagcaagacgcctcagaaaacataccaatccgg
tcccggtcagacagcacactccctggctcagaatctgatgctgattcagtgcagacgtct
tccagccacaagtcgggtgaacccaaggccacagcaaagtcggaaagtagaagtaaggat
gcaaaaaggatatcctcttctcgctccaaattagaggaaaccgaaaaaagttctcaccat
gcacgttctgagaaggacgaaaggacctgtagttactcaaagtctgaccgagaatccaaa
tctgaccgagaattaaggtcaaccgctgaccgagaatccaagtatgaccgagaatcaaag
cacacaccctcgcggtcctcccgctctgacaaagaccgcaaaaggactaagagtcggtca
aggtccagatcaagaggcccccggacgagttctaggcctgagacacgttccagatctgag
agatctagaagcgagagagggtcaggatcacggtctgatcggtcatatcatgactctgag
cggaggtcaggaggtcacagaagttctccatacagagagaggagaggcagctctcgctct
cagactgatagcagcagagtccgaggcgacagttctgactctgaagatgaccacagaaga
actcggactagaacaagtgattccagcaggtcgtccacccattctagcttgcagagagat
tcaaagtcatcctcatctcgctcaaaatctgaacgagactcgaaatatatagattcccct
tacttttcagagatagataaaagaacacaatcttctaagtctgagagggcctcaaagaga
actgttgactcctattccctccaaaagtgctctcctgaaggagaatctaatcacaggaaa
tccaacacccactacaagcaggacatcagtgttcgatccactcattccagtccacatgcc
ctctctcaaacatcggacaaaagtctccagaaaagcagctctagtgaatttgaggtagct
cacaaagggaagtctcagtcacagggctctgatcgctcttctggctctgaaggggcatgg
acatcttccaccagtaaatcagactctaagcaaatgtccgcctccaagtcgtcattgaaa
tctaatagacaatcaaacgacacatttcacagtccaaataagatacaaacacatgaaacc
ccttctggtgctcactctcagagcaaaaatgacaaagctggagcagattcccagctagca
gatacttgccaaagggaggacgttggcaatatggatgacatcacatcccaagataaagac
ttacaaaaaccaactctgtcgttaccttcaaattgtgatccaactcacagattgcgagaa
ccagcgttggatctagttaatgagaatattaatcattgcattgaggttcagaatgtctcg
gcagcaactttaccgaacacctctagtggagaccaattatgtgaaaaatttgccttaggg
gacattgacaatgttaataaaagcatttgctctgaacaaaaagaagattcacagcgtgta
gacccccaaatgggatccaccgagaagccggatgatgtagccaactctagcttttcctgc
agtaatgaacaagtaatacccagcctggataagactgtttttcaaggttcagttgggtca
aagtcatcaccatctacagtagacgtatctgtcagagaccaccctaaggagaatactaaa
ccagaaaatactttctattctagtagaaatgtgaatatcaagatgcagtcttgcacaagc
gtccctctcaaatctgaaccctctagtcctgaacctcaacaatttcccaacaagactgaa
caacagaactctagtttgaggaaaaaccgaggtaaaacaaaaagatcgcgttgggatatt
gttggacaagacacctcagacagtgataatcctcagaaatggccttcccaagaaagtaaa
cctgctgtgaaaaaggtaatctctgtcaagagaattgagttttctaaagacgtcagccag
gaagatccatctctgattaagggtaaactgaaatgggaagctgagttgcattccaaaacg
attaagcaagaaattgtcatcgcacaagaacacagctcagtaccaatatctcttaggaaa
gaccagtcggagtccgcaaacccaactgcacaaccaggcacctgtggaaccagcaatgac
cattcagacatcaaaccccacatcagccaaatggatggagagccctcacttttaaataat
acctcacatgtagacaacgctagaagggagcagggtaggaatggcgacggtaatgaagag
aaacctaaagatggcactcacaagagcaaactggtgaagagacgagtgtcgagccaggac
ggtgtaggccaaagcgaggacagtgactctgacgattcagagtcggactctgactgcggt
gctgctgtgaaacggatgcactctgtggtggttgtgccaaagaattccaccctaacactc
tcggacacaacagacaagcctgtgtctccctgcactccaagcactagcccaggacgtcaa
caacacgctaacagggctagtggccaagagggtgacctggacaggaaggagatcacaagc
agagtcagcccacagcagagacatcgaggctttcccaccatgtgtgagcgcactaggcag
gccagtaatgcttgtgttgatggaagtctctctttacatgacattatggtgtatcaatca
cagagcaatatggtagatagcaccagccagctcgagggctccaatgccaccgatgcccag
ccttataaggatccttatagcagtgcccatgagagaccaaagattggtgcagcaacggtg
agccaggttgctgcccacagccttgagacctccttcaggcagtctgacacagggcatcca
cagcattatgagagtggcaggggtggcgggatgctgtcccgttaccaacatggagacttt
gctagctctgatgacttcaacagcagtctgggcagtctgggctgggacttcacacagccg
gagcagcccagcagtacgtaccagcagcctgacagcagctatggggcgtcacaacagcat
cccaacactcaacagccagggaactcttctttggggcaggtgtacagagcagacaacggg
gcctgctggacccaactaccaactacgactcaacccacctgcagaccggtctacctccat
gtgcctgcaacacattaccaggagcctgttggtcaagtccatcctgactccctgactaat
gactgtgatgaggacagtgaggggaaaccagcaggccttagtagactagctggggaatgc
aatggtcccaaccttccaggctcgctagccttcgtccaagcccatgaaataagcagcaac
tgcagaggctctgtcaacgccactccagagagcattgccatagttgaacctcccagagac
aaggacaactcgaggccccacagaggcaggggtcctcccaagaagaggcgtccagaaatg
gagtcagattcggacagtgaggcagaacctgggctcgctagcaaaagggagcgactggca
gaaagggagctccccaaggtctcctccaaagactccagggagactccaggtcaggccgag
gtgcaacgtcctttgctcagtctgagggacttccgggacgccagcaactggagggagatg
gcaaggtctaagaagatgccaccatactttgacctgattgaggaaaacctgtatctgact
gaacggaagaagaacaagtctcatcgagacatcaagcgaatgcagtgtgagtgctctatg
ctctcgagggaggagcggtctcgtggaatgatggcttgtggggaggactgccttaaccgt
ctgctgatgatcgagtgctcatcgcggtgcctgaatacaggatactgctccaaccgacgc
ttccagatgaaacagcatgcagactttgaggtcatcctgactgaagaaaagggctgggga
ctgagggcggccagggacctgatgccaaacacgtttgtgctggagtactgcggagaggtg
ttggaccacaaggagttcaagatgcgggtgaaaaagtacgctagcatgaagaacatccac
tactatttcatggccttgaagaataatgagatcatagacgccacactgaaggggaactgc
tcacgcttcatgaaccacagctgtgagcccaactgtgagacccagaagtggactgtgaac
ggccagctgagagttgggttcttcacctccaggaccgtcacggctggtacagagcttacc
ttcgattaccagttccagagatatgggaaagaggcccagaagtgcttctgtggggctccc
agctgccgaggcttcctaggcggggagaaccgggtcagtgtaagagcagcagcagggaag
atgaagaaagagcgccctcgcaagaaggacacctccgtgagcaatgcacttactacggtg
gatgaggagctagaggctctgctggagaacggggagggtctgtacgatgagaaggaggtg
gtgtctctctgcaggctgatggtcagagtggagaccatggagcagaaactcatctgcctc
aaacttatccaagatacccagagcccgtcctgcctgaagcagttcctggaccatcacggt
ctgtctctactgtggatcttcatggtggagctctctgaagccaagggcaacagtgtcaac
aacatcaaactgcagtttcagatcatgaagaccctgtcagtattgcctatctccactaag
aacatgttggaggagagtcatgtcctgagcctcatccagcgctgggcccagacacacaca
cactccctcccccagccccccggggctgaccaggacggctactccagtgagaacacgtcc
cgcgcccagacccctctcaacactcccgacggttcctctgcctcagtcgccaaactgggc
cctgagctggacagtgacacccccaaactgggccctgagctggacagtgacacccccaaa
cgggccgtgtaccgtcgcctcaagatcagcgagaacagcctggacagcgccatgtcggac
gccagcaaggcctcggacggtaaggaggaggaagaggaggatgaagaggagatggaggat
gaggaggcctcacgatctgagcctccagtggagagcagcaaacgggcacagactgagccg
gtggttgaggcccaggcccagactgagccggtggttgaggcccaggccgatccggtggtt
gaggcccaggccgagccggtggttgaggcccaggccgagccggtggttgaggcccaggcc
gagccggtggttgaggcccaggccgagccggtggttgaggcccaggccgagccggtggtt
gaggcccaggccgagccggtggttgaggcccaggccgagccggtggttgaggcccaggcc
gagccggtggttgaggcccaggcccaggccgagccggtggttgaggcccaggcccaggcc
gagccggtggttgaggcccaggcccaggccgagccggtggttgaggcccaggcccaggcc
gagccggtggttgaggcccaggcccaggccgagccggtggttgaggcccagactcccaca
acggaggagccaacagaagagccagtcacagagctgaaggagacaccagaggtggtagtg
gaggccatggaggtcacagaacccaaagctgagagccaagacgctaaagatcaggaggag
ggggtgaaagacgagtggagtgagggacagaaggagaacggagaggaggagcatgcaagt
cagtcaatggaggagagtgaggttgtggcgggagagcaggccaacatggaggtccaggtc
caggaatcatcacagattgagccagttcagacggaagttactgagaccccttcagaggag
catcctgctggggagaaggaggagaccaccacagcagagaccgggactgaagatgctgag
aaggctccaggcagccaggaacagccaggccaggtggcccccgaggttcccccggaggtg
gcccctggcactgaggacgctgcccaggtagtgaccccagcctcggaggcccctccacct
ccctctccggtggtccccgtggagcctacggcggtggggacgccctcgcaggatgaggag
gagggtgtgtctgatgtggagagtgagaggagccaggagccccagctcagagctgtggat
ataggagacatggctgctaggttactggacagctggagggacctgaaggaggtgtacagg
atccccaagaagagccaggtggagaaggagacacacgatcgtagtcgagaccgagacgct
gccctggccccggctcgcaccccctccggcagccgggaacgtgagagggagcgggacaag
gagagggacagggaacgagatcgagacagagaccgggacagggagcgtgacagagaaagg
gacagagattgggagcgagacagggagagggacagagagcgagactgggacagagactcc
gagaagacaccccgcagcacagagagacggaggagacgtgcctccacctcccccccgccc
tcagcatacgagcggagcagcaggcgtaacgaggaccggtttgacctggctaacagcagt
aagaagagccgtaccatcaccaaggagcgcaccaagctgtccacagaggagcgcaggaag
ctgtttgaacaggaggtggcccagcgtgaggcccagaaacagcaacaacagttacaacag
caacaacagcaacaacaacaacaacaacagcagcagcaacagctccagactctagcctac
gatgcagccctgacctacactaccagcccagctggcttccttcactacccccccggctac
cccctccagacctacgtggaccccatcaaccccaacgcaggcaaggtgttgctgcctact
cctcctgtggagcccctggtcccagccaccctggccttcgagcagacccctccccaggct
ctgatcaccgagctgggcatggcctctccctcctccacctcccagccccctccagtatcc
aacctgtccagcctcccccaacacatccagcaacccaccgcccctctggagctccaccgc
ggcacgccccagcagtacaccctgcagcccagcgtggcaggccaggaccctggtgtagcc
gtcctgtcagtgcctgccgtgtcggcgccccctcaggtgtcggcgggccaggggagttac
accacgctgtgggaccctaccacccagcaggctgtgacagtacagacccagatagcacca
cagtaccaggttgtcccagcacctcctcccactcagacagccatctactatcagggccag
ccctgtcagaccatctacagtatcccaactgcctacccacaggccaacacacctgtcctg
caggcgtactctgatccggctgccagctacctccatggtcagccggtgtacacaggtcac
cagcagggagtggtggttcagcaggggggcacggtcactaccatcgtcacctcacagact
gtccagcaggagttgcccaacactgtgttagtccccaacagtatgatagacctgccgcct
ccctctcctcccaaacccaaaaccatcgtcctgccccccagctggaaggtagcacgggac
ggagagggaaagatctactactaccacgtcatcaccaggcagactcagtgggatcctccc
agcagctgggacggggccagtgaagacgcccacagcttagaccacgaggctgagatggac
ctggggacgcccacctacgacgagaacccctccaagttctctactaagacggcagaggca
gacacatccagtgagctggccaagaggagcaaggagacgttccggaaagagatgtcccag
ttcattgtgacctgcttgaacccgttccggaaaccagactgcaaactgggacgcatcatc
aacactgaggatttcaaacacctagccagaaagctaactcacggtgtgatgaacaaggag
ctgaaatcctgcaagaacccagaggacctggagtgcaacgagaacgtcaagcacaagacc
aaggagtacatcaagaaatacatgcagaagtttggcagcatctaccggcccaaagaggac
actgagctggactaa
DBGET
integrated database retrieval system
