Coregonus clupeaformis (lake whitefish): 121542635
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Entry
121542635 CDS
T08357
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04510
Focal adhesion
cclu04520
Adherens junction
cclu04916
Melanogenesis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121542635
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121542635
04520 Adherens junction
121542635
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121542635
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121542635
BRITE hierarchy
Motif
Pfam:
Arm
Cnd1
HEAT_2
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
121542635
NCBI-ProteinID:
XP_041708022
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Position
28:complement(5650639..5682334)
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AA seq
790 aa
AA seq
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MASQSDLMELDMTMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEQGFSQSFTQDQVADIDGQYAMTRAQRVRAAMFPETLDEGMQLPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTTLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGDALGYRQ
EDPSYRSFHSGGYGQDSMGMDSMMDHDMGAHHPGPEYPVDGLPDLGHAQDLIDGLPPGDS
NQLAWFDTDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtctgatctgatggagctggacatgacaatggagcctgatcggaaggct
gcagtgagccattggcagcagcagtcgtacctggactctggtatccactctggggcaacc
accaccgccccctccctgagcgggaagggcaacccagaggaggaggatgtggacaaccag
gtgctgtacgagtgggagcagggcttctctcagtccttcacacaagaccaagtggcagac
attgacgggcagtatgccatgaccagagcccagagggtgcgtgcagccatgttcccagag
accctggacgagggcatgcagctcccctccacccagttcgatggggcccaccccaccaac
gtgcagcggctggctgagccctctcagatgctgaagcacgccgtggtgaacctcatcaat
taccaggatgacgccgagctggccacacgcgccatccccgagctgaccaaactactcaac
gacgaggaccaggtggtggtgaacaaggctgcagtgatggtgcaccagctgtccaagaag
gaggctagccgccacgccatcatgcgctccccccagatggtgtcggcaatcgtgcgcacc
atgcagaacaccaacgatgtggaaacggcccgctgcaccgccggcaccctgcacaacctg
tcccaccacagagagggtctgctggccatcttcaagtcagggggcatccccgccctcgtc
aaaatgctcgggtccccagtggactcggtgctgttctacgccatcaccaccctacacaac
ctgctgctccatcaggagggtgccaagatggccgtgcgcctggccggaggcctgcagaaa
atggtggccttgctcaacaagacaaatgtcaaattcctcgccatcacaacagattgtctt
cagatccttgcctacggcaaccaagaaagcaagcttatcatcctggccagcggcggccct
caggccctggtcaacatcatgaggacctacacatacgagaagctgttgtggactaccagt
agagttctcaaagtgctctctgtctgctccagcaacaagcctgccatcgtagaggctggt
ggtatgcaagcccttgggcttcacctcacagaccccagtcagagactggtccagaactgc
ctgtggaccctcaggaacctttcagacgctgccaccaaacagacgaccttagctgaagta
gatgtgatgcaggagggtatggaaggtctgctggggaccctggtccagctcctgggctct
gatgacatcaacgtggtgacgtgtgccgccggcatcctgtctaacctcacctgcaacaac
tacaagaacaagatgatggtgtgccaggttggcgggatcgaggcgctggtccgtaccgtg
ctgcgtgccggagaccgcgaggacatcaccgagccggccatctgcgccctgcgccacctc
accagccgccaccaggacgccgagatggcccagaatgccgtgcggctgcactacggcctg
cctgtggtggtgaagctgctgcaccccccctcccactggcctctcatcaaggccacagtg
ggtctgatccgtaacctggctctgtgtccagccaaccacgcccctctgcgtgagcaggga
gccatccccagactggtgcagctgctggtcagagcccaccaggacacccagagacgcacc
tccatgggaggcacccagcagcagtttgtggagggagttcgtatggaggagatcgtggag
ggctgtactggagctctgcacatcctggctagagatgttcacaacagaatcgtcatcaga
ggactcaacaccattccactctttgtccagctgttgtactctcccattgagaacattcag
cgtgtggctgcaggagttctgtgtgagttggcccaggacaaggaggcagcggaggccatc
gaggctgagggcgccaccgcccccctcacagagctgctccactccaggaacgagggcgtg
gctacctatgctgctgctgttctgttccgtatgtctgaagacaagccccaggactataag
aagcgcctgtctgtagagctcaccagctccctgttcaggacggagcctatgacctggaac
gagactggagatctgggcctggacatcggagctcagggagatgccctgggctaccgtcag
gaagaccctagctaccgctccttccactctgggggatatgggcaggactccatgggcatg
gactccatgatggaccatgacatgggcgcccaccaccccggccccgaatacccagtcgac
gggctgcccgacctgggccacgcccaagacctgatcgatgggctgcccccaggcgacagc
aatcagttggcttggtttgatactgacctgtaa
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