Coregonus clupeaformis (lake whitefish): 121542883
Help
Entry
121542883 CDS
T08357
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121542883
04147 Exosome [BR:
cclu04147
]
121542883
04090 CD molecules [BR:
cclu04090
]
121542883
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121542883
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121542883
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121542883
Exosomal proteins of bladder cancer cells
121542883
CD molecules [BR:
cclu04090
]
Proteins
121542883
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
121542883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_5
Ig_4
C2-set_2
Podoplanin
PKD
VSP
DUF4690
CYYR1
Amnionless
DUF3042
Motif
Other DBs
NCBI-GeneID:
121542883
NCBI-ProteinID:
XP_045064270
LinkDB
All DBs
Position
28:15488711..15502531
Genome browser
AA seq
562 aa
AA seq
DB search
METATVVSLTMAVLSGFCHGDLLPAGPLNGALGENITFNVTLSPPEPPKTVTWNVDGGTI
IILSGGTETVFGNYKGRVTLSRTTGSLELRNLSLDDSGEYLVNIITAADVSLKKTTRLKV
FERVSDVMLTSNDSDILVEFNSSVSLSCSSSGSSPFSYRWLNSSSEVTASDGVQVRDGNS
TLTIVRVTRYDQGPYTCIVSNPISSVPSQNVTLTISYGPDRTTMNVTPPDVLYGSGSNLT
LSCSAESSPPAQFQWALNGTLLYNRGPELSLEHIQASQSGSYSCWAHNTRTLRYQISEPS
DITVLERISNVNIPNPTNLPIIEGNYVTLTCDASGSISTREWMKAGQPLSLSDNILFSED
NKTASINPVKRTDSGIYMIPVSVTFTLTCSADSNPPASYTWMHNETKIPGHSPEFTKENS
EYFDSGNYTCTATNYVTGNNTSAVHELSVKAEGSLTPGLSAGAITGIVIGVLLVVGVAVG
VAVFFIKKNGTNADPIHRRGSKQPAYENQSPVHENPSPVYENTRQNQSPPLPLTVSKPWS
PGMSLHVCILLQSYCNKQDQLA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctacagttgtttctctcaccatggcagtactctcaggtttctgtcatgga
gacttgttaccagccggacccctgaatggagcattaggagagaatattacatttaatgta
accctaagccccccagaaccacctaaaacagtcacctggaatgttgatggaggcactata
ataattctatctggtggcactgaaactgtatttggtaattacaaaggcagggtcaccctg
tctagaactactggatctctggagctcaggaatctgtccctggatgacagtggagaatac
ttagtgaatattattactgctgcagatgtatcactgaaaaaaactactagactgaaagta
tttgagcgagtctccgatgtgatgctaacttccaatgacagtgacatattagtggagttc
aatagctctgtcagtctgtcctgctcctcctctggctcctcccccttctcttaccgctgg
ctgaatagcagctctgaggtcacagccagtgatggagttcaggttagagatgggaacagc
accctcaccatagtcagagtgacccggtatgaccaggggccatacacgtgtattgtgtcc
aaccccatcagcagtgtccccagccagaatgtaaccctcaccatcagctatggtccagat
agaaccacaatgaatgtgacacctccagatgtactgtatggatcagggtcaaacctcact
ctgtcctgctcagctgaatccagtcctcctgcccagtttcagtgggctctgaatggaaca
ctgctgtacaataggggaccagaactcagtctggagcacatccaggccagtcagagtggt
agctacagctgctgggcccataataccagaaccctgaggtaccagatatctgagccctct
gacatcactgtgctggaaagaatatctaatgttaacatccctaatcccacaaacctgcca
attatcgaggggaactatgtcaccttaacctgtgatgcttctggctccatcagtaccaga
gagtggatgaaggctggtcagcctctgtctcttagtgacaatattttattctctgaggat
aataagacagcatctatcaaccctgtgaagagaaccgacagtgggatttacatgatacct
gtatccgtaacatttacattgacctgctctgctgactccaacccccctgctagttacacc
tggatgcacaatgagacaaagatacctggacattcacctgagttcactaaagagaatagt
gaatactttgacagtgggaattacacctgtacagcaacaaattatgtcactgggaacaac
acatctgcggtccatgaactgtcagtaaaagcggagggctctctaactccaggactgtct
gctggtgccatcactgggattgtgattggagtgttgctggttgtcggagtggcggttggt
gttgcagtgttcttcatcaagaaaaatggaaccaatgctgacccaatacatcgaagaggc
tctaaacaacctgcatatgagaaccaatcacctgtgcatgagaacccatcacctgtgtat
gagaacacaagacaaaatcaatctccacctctacccctgacagtaagtaagccctggtca
cctgggatgtctctgcatgtctgtattctactacagtcttactgtaataaacaagatcaa
ctagcttaa
DBGET
integrated database retrieval system
