Coregonus clupeaformis (lake whitefish): 121543083
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Entry
121543083 CDS
T08357
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121543083 (ntrk1)
04020 Calcium signaling pathway
121543083 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121543083 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121543083 (ntrk1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121543083 (ntrk1)
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
121543083 (ntrk1)
BRITE hierarchy
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
LRR_8
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
CFC
Motif
Other DBs
NCBI-GeneID:
121543083
NCBI-ProteinID:
XP_045081913
LinkDB
All DBs
Position
17:complement(24662056..24689848)
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AA seq
797 aa
AA seq
DB search
MAVVVGSAPWAAPLALVLLAITLAVPALGGCPSACRCSFAMLQCLEPDGIATIPALALQE
SENVTEIYIENQANLENITEVDLANYRELKNLTVTFCRLAYISANAFQHNLKLQYVNLAS
NSLEHISWKVFHFLPLLNLVLRDNPLVCSCDIHWLQQWQLNEHSDLDNQPLHCFSNGHAL
RLDSLVMENCTEPEVAIVHANTKVQEGGNLTFVCQVTGVPMPVVRWRTNKLLSRYTVQER
FWGSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPAKIIFLHDAEPQHH
WCFPFKVDGNPEPSIHWLFNGSNLTEGRYTYTQFIPDTDDGSVKHGCLFLNKPTHLNNGL
YTIMVENSLGVDRATATGNFMNNPFDPFDPEGIIPVLEESDPRYVDANYVSVQVSVAVGL
AVFACTFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNFGASPPSSDDSVMS
SFVENPQYFCGIFKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSPDSDKMLVA
IKTLKDANESTRQDFQREAELLTLLQHQHIVRFYGVCTDGEPLAMVFEYMRHGDLNRFLR
AHGPDAHILEEVKMPPLGQLTLPQMLDIAAQIASGMVYLASLHFVHRDLATRNCLVGDMG
EGLMVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVLWE
IFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHGLMQGCWQREPQQRLVIKDIHS
RLLALVKSPPIYLDILG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggttgtgggttcagctccatgggcagccccactggccctggtactactggca
atcaccctggcagtgccagccctgggagggtgcccatccgcctgccggtgctccttcgcc
atgctgcagtgcctggagcctgatggcattgccactatacccgcgttggcactacaggag
agcgagaacgtcacggaaatttacatcgaaaatcaagccaacctggagaacatcacagaa
gtagaccttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcg
tacatctcggctaatgctttccaacacaacctcaagctccaatacgtaaacctggcatct
aactccctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggtt
ttgagggacaacccccttgtgtgctcatgtgatatccattggctgcagcaatggcagctt
aacgagcacagtgacctcgacaaccaaccgctgcactgcttctccaatggccatgccctg
cggttggactccttagtgatggagaattgcactgaaccggaggtcgccattgtccatgcc
aacaccaaggtccaggaggggggcaacctgacatttgtgtgtcaggtgacaggagtgccc
atgcctgtagtgaggtggcgcacaaataaactgctgtctcgctatactgtacaggagagg
ttctggggctccactttggagctggagctgcagctgtggaatatgtcctcagaagacaac
ctgcacaacttgacctgtgaggcagagaaccgggccgggcctggggaggagaaggtgacg
ttggacattgaatttccagccaaaatcatattcctgcacgacgccgagccacagcaccac
tggtgtttcccctttaaggtggacgggaaccctgagccatccatccactggcttttcaac
ggctccaacctgacagagggccgctacacctacacacagttcattcctgacacggatgat
ggctctgtgaagcacggctgtctattcctcaacaagcccacccacctgaacaacggcctc
tacaccatcatggtggagaacagcctgggcgtggatcgagccacggccacagggaatttc
atgaacaacccctttgacccctttgaccctgagggcatcatcccagtccttgaagaaagt
gatccacgctatgttgatgctaattatgtttctgtgcaggtgtcggtggcagtgggtctg
gctgtgtttgcttgcaccttcctcctcattatggtactggtcatcaacaagtgtggacag
cagtccaagtttggtattcaccgttcatctgtcttgggaacagaggatgatcttgctgtg
tcactgcgtttcatgaactttggggccagccctccttcctctgacgactctgtcatgtcc
agctttgtggagaacccccagtacttctgtggcatattcaaagacaaagacatgtgtgtg
cagcacattaaaagacaggacatagttctgaagtgggaactgggtgagggggcctttggc
aaagtctacctggcagagtgtgccaacctcagtccggacagtgacaaaatgctggtggcc
atcaagactctgaaggatgccaacgagtcgacccggcaggacttccagagagaggctgag
ctgctcacattgctccagcaccagcacatcgttcgcttctacggagtgtgtacagacgga
gagccactggccatggtgtttgaatacatgagacatggagacctcaaccgcttcctcagg
gcccacggtccagacgcccatatcctggaggaggtgaaaatgcccccactgggccagctc
actcttccccagatgctggacatcgccgcccagatcgcctcgggcatggtctacctggcc
tcccttcacttcgtgcaccgggacctggccacacgcaactgcctggtgggagatatggga
gagggtctgatggtcaagataggagactttggcatgtcccgggacatctacagcacagac
tactacagggtgggtgggcgtacgatgcttcctattcgctggatgcccccggagagcatc
atgtacaggaagttcaccacggagagtgatatctggagctttggagtggtcctctgggag
atcttcacctatgggaaacagccctggtaccagctctccaacagcgaggctatcgagtgc
attacacagggccgggagctggagagaccacgcacttgccccaaagaggtgcacggcctg
atgcagggctgctggcagagggagccccagcagaggctggtcatcaaggacatccacagc
cgcctcctggccctggtgaagagcccccctatctacctggacatccttgggtag
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