Coregonus clupeaformis (lake whitefish): 121543228 Help Entry 121543228         CDS       T08357                                  Name (RefSeq) ATP-dependent translocase ABCB1   KO K05658   ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu02010   ABC transporters Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09131 Membrane transport    02010 ABC transporters     121543228  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:cclu02000]     121543228    04147 Exosome [BR:cclu04147]     121543228    04090 CD molecules [BR:cclu04090]     121543228 Enzymes [BR:cclu01000]  7. Translocases   7.6  Catalysing the translocation of other compounds    7.6.2  Linked to the hydrolysis of a nucleoside triphosphate     7.6.2.2  ABC-type xenobiotic transporter      121543228 Transporters [BR:cclu02000]  ABC transporters, eukaryotic type   ABCB (MDR/TAP) subfamily    ABCB1, 4, 5 subgroups     121543228 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121543228 CD molecules [BR:cclu04090]  Proteins   121543228 BRITE hierarchy Motif Pfam:  ABC_membrane ABC_tran SMC_N AAA_22 ABC_ATPase Zeta_toxin Rad17 AAA_16 RsgA_GTPase AAA_5 G-alpha AAA_28 AAA_29 AAA_7 AAA_14 RNA_helicase AAA_30 PRK ATP-synt_ab NTPase_1 Abhydrolase_2 Motif Other DBs NCBI-GeneID:  121543228 NCBI-ProteinID:  XP_041708910 LinkDB All DBs Position 17:1911430..1938623 Genome browser AA seq 1281 aa AA seqDB search MGKKDEIAVAKAKIEQNGDIGEDKDEGKKGEKEKEPKMPMIGAIALFRFADGWDRLMMVL GTIMAIVNGTVLPLMCIVFGDMTDGFIRDSIQTQNNFTNITFPVFNTTLGEEMTGHAIYY SIMGAVVLVAAYMQVAFWTLAAGRQVKRLRKLFFHCIMQQEIGWFDVNETGELNTRLTDD IYKINEGIGDKVGMLIQSFTTFIAAFIIGFSQGWKLTLVILAVSPVLGFSAFIFSKVLTS FTSLEQGAYAKAGAVAEEVISSVRTVFAFGGQQKEITRYQKNLEDAMNMGIRKAISANMA MGFTFLMIYLSYALSFWYGSTLIISGEYTIGTVLTVFFTVLIGAFAMGQTSPNVQAFASA RGAAHKVYNIIDNKPHINSYSDHGHKPDVIKGNIEFNNIHFTYPSRPDVKVLNGMSLTVR SGQTIALVGSSGCGKSTTVQLLQRFYDPQEGSVYVDGHDVRSLNVRFLREMIGVVSQEPI LFATTIAENIRYGRPDVTHQEIEQAAREANAYDFIMTLPDKFETLVGDRGTQMSGGQKQR IAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRQGRTTIIVAHRLSTIRNADVI AGFQKGEIVELGTHSQLMEKEGVYHTLVTMQTFKSSEEGEEEVEEQVLEEKSASVTPFSE TTLIRRKSTKGSSFIGSEKGDKDKTEKEEEDEEVPPVSFLKVLKLNLPEWPYMVVGVICA TINGGMQPLFAVIFSKIIAVFAEQDQELVRQRSSFYSIMFAVIGVVSFITMFLQGFCFGK AGEILTMKLRLMAFKAMMRQELGWYDSHKNSVGALTTRLATDAAQVQGATGVRLATLAQN VANLGTSLIISFVYGWQLTLLILCVVPVMAVAGGIQMKMLSGHAVKDKKELEQAGKIATE AIENIRTVASLTREQKFESLYQENLIVPYKNSQKKAHVYGITFSFSQAMIYFAYAGCFRF GAWLIEEGIMTFENVFLVISAVLYGAMAVGEANSFTPNYAKAKISASHLMFLINREPAID NCSQEGETPDHFDGNVRFEGVTFNYPSRPDLAVLQGLELKVQKGQTLALVGSSGCGKSTT IQLLERFYDPLQGTVMLDDSDAKKLNIHWLRAQMGIVSQEPVLFDCSLAENIAYGDNTRK VTMEEIQSAAKAANIHSFIDDLPQKYDTQAGDKGTQLSGGQKQRIAIARAILRNPKVLLL DEATSALDTESERVVQEALDVARQGRTCIVVAHRLSTIQNADLIAVFQKGVVVEQGTHQQ LLSQRGVYYSLVTTQLGHGRK NT seq 3846 nt NT seq  +upstreamnt  +downstreamnt atgggcaagaaggatgagatagccgtggccaaagccaagattgagcaaaacggagacatt ggtgaggataaagatgaagggaagaagggggaaaaggagaaagagccaaagatgccgatg attggcgccatagctctgttcaggtttgctgatggttgggacaggttgatgatggtgctg gggaccatcatggccattgtcaatggaactgtccttcctctcatgtgtatcgtctttggg gacatgactgacggcttcataagagactccatacagacacagaataacttcaccaacatc actttccctgttttcaacaccactctgggagaggagatgactggccatgctatctactac tctataatgggtgcggtggtgttggtagcagcttacatgcaggtggccttctggacactg gcggcaggcaggcaggtcaagcgcctcaggaagctcttcttccactgcatcatgcagcag gagatcggctggttcgacgtcaacgagacgggagaactcaacacacgcctaacagatgac atctataagatcaacgaggggataggggacaaggtgggcatgttgatccagtccttcacc accttcatcgctgccttcatcatcggcttcagccaaggatggaagctcaccctggtcatc ctggctgtcagccctgtgctgggcttctctgcttttatattcagcaaggtactgacatcc ttcacgtccctggagcagggtgcttatgctaaagctggagccgtggctgaggaggtgatc tcttctgtcagaacagtcttcgcctttggtggacaacagaaggagataaccaggtaccag aagaacctggaggatgctatgaacatggggatccgtaaagccatctctgctaacatggct atgggcttcaccttcctgatgatctacctgtcctacgctctgtccttctggtatggcagc acactcatcatatctggagaatacaccattggaactgtcctcaccgtgttcttcacagtg ctgatcggggcatttgccatgggacagacttctcctaatgtccaggccttcgccagtgcc cggggggcggcacacaaagtctacaacatcatcgacaataaaccccacatcaacagctac tcagaccacggccacaagcctgatgtcatcaaaggaaacatagagtttaacaacatccat ttcacctacccctcacgacctgacgtcaaagtgttgaatggaatgtctctaacggtgcgt agtggccagaccatagccctggtaggcagtagcggctgtgggaaaagcaccaccgttcag ctgctgcagaggttctatgatccacaagagggatcagtgtatgtagacggtcatgacgtg cgctccctgaacgtgcgcttcctgagagagatgattggcgtggtcagtcaggagcccatc ctgtttgctaccaccatcgctgagaacattcgctacggtcgacctgacgtcactcatcag gagatagaacaggctgcccgggaggccaacgcctacgacttcatcatgacactacctgac aaatttgagactctggttggagacagagggacccagatgagtggaggacagaaacagagg atcgctatcgcacgtgctctcgtacgcaaccccaagatcctcttgttggatgaggctacc tcagcccttgacgccgaaagtgagaccatcgtacaggctgctttggacaaggtgagacag ggtcgtactaccatcattgtggcccatcgtctgtctactatccgtaatgctgatgtcatc gccggcttccagaagggagagattgtagagctgggaacacacagccaactgatggaaaaa gaaggagtctaccacacacttgtcaccatgcagacgtttaagagttctgaggagggcgaa gaggaggtggaggagcaggttctggaggagaagagtgcgtcagtgacgccgttctcagag accaccctcatcaggaggaagtctaccaagggatcatccttcatcggctcagagaaagga gacaaggacaagaccgagaaggaggaagaggatgaggaggttcctcctgtgtcgtttctg aaggtgttgaagctgaaccttcctgagtggccctatatggtggttggtgtgatctgtgcc actatcaacggaggcatgcagcctctcttcgctgtcatcttctctaaaatcatcgctgtg tttgcagagcaagaccaagaactggttagacaacgctcctccttctactctatcatgttc gccgtcattggagtcgtctccttcataaccatgttcctacagggattctgttttgggaag gctggtgagattctgaccatgaagctgagactgatggcctttaaagctatgatgagacag gagttgggctggtatgacagtcacaagaacagtgttggagctctcaccactagactggct acagacgcagcacaagtacagggggctacaggagtgcgtttggccactctggcccagaac gtggctaacctgggcaccagtctgatcatctcgtttgtgtacggctggcagctgactctt ctcatcctgtgtgtggtacctgtcatggctgtagctggaggcatacagatgaagatgctc tctggtcacgctgtcaaagacaagaaagagctagaacaggctggcaagattgccacagaa gccatagagaacatccgtacggtggcgtctctcaccagagagcagaagtttgagtctctg taccaggagaacctcatagtgccttacaagaactctcagaagaaggcccatgtgtatggc atcacattctccttctctcaggctatgatctactttgcctatgcaggctgcttccgcttc ggagcctggctcatagaggaaggcattatgaccttcgaaaatgtcttcctggtgatctct gcagtgctgtacggagccatggcagtaggagaggccaactcctttacgcctaactatgcc aaggccaagatatcagcatctcaccttatgttcctcatcaacagagaacctgccatagac aactgctcacaggagggagaaacaccggaccactttgatggtaacgtgcgtttcgagggg gtgacgttcaactacccgtcccgtccagaccttgctgtcctgcaggggctggagctgaag gtgcagaagggacagactctagccctggtgggcagcagtggctgtgggaagagtaccacc atacaattactggagcgattctacgacccactacagggcacagtgatgttggatgacagt gatgctaagaagcttaacatccattggctgagggcccagatgggcatcgtatcccaggag cccgtgctgtttgactgtagtctggcagagaacattgcctacggagacaacacacgcaaa gttaccatggaggagatccagagtgctgctaaagctgccaacatacacagcttcatagac gacctgcctcagaagtatgacacccaagccggtgacaaggggacccagttgtcaggaggt cagaagcagcgtatagccatcgccagagccatcctccgcaaccccaaagtcctgctgctg gacgaggccacctccgcactggacacagagagcgagagggtggtgcaggaggcactggac gtggctcggcagggcaggacgtgtatcgtggtggcccaccgcctgtccaccatccagaac gctgacctgatcgctgtcttccagaagggtgtggtggtggagcagggcactcatcaacaa ctactgtcccagagaggagtatactactcactggttaccacccagctgggccatggcaga aaatga

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