Coregonus clupeaformis (lake whitefish): 121543702
Help
Entry
121543702 CDS
T08357
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1-like isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543702
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
121543702
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121543702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
121543702
NCBI-ProteinID:
XP_041709773
LinkDB
All DBs
Position
28:complement(35242174..35263587)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSNLVRSKKDKEIIAEYESQVKDVRAQLVEQQRCLEQQTEMRVQLLQDLQDFFRKKAEIE
TEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDL
YLNNVITRLTHISDDSARLLKRSKEITFQLQEDLMKLLNELYTVMKTYHMYHGETLNAET
KLRDAERQVGPGGGVEPLFGMRIEERHQRRNAVRKMEKMREKRKAKYSENKLKSLKARNE
YLLTMEATNSSVFKYYIHDLPDIIDCCDLGYHSSLSRALKTYLSAELSLEASRRTGLEVL
EGAVEGLDPARDRQRLLGLYPTAFCPPPRFSFQPHMGDPVTQIAAQPQVQAELASRLQQL
QSRLSTLKIENEEVKKTWGATLTTLQDMTVLDDYDVSQSFTHSPSSESVKSSVSDGYLNK
PSLAKRRANQQETELFYFTKFREYLEGSNLISKLQAKHDLLKKAMAEGYIADTLTTSRGR
NNSHSKHQDSTKAIPLLVESCIRYINLHGLQHQGIFRVSGSQVEVNDIKNSFERGHDPLI
DEENNHDINSVAGVLKLYFRGLENPLFPKERFNDLISCVRKESLYDRAQCIRKILLGVPR
ATLVVMRYLFAFLNHLSQYSDENMMDAGNLAIVFGPTLLPTPDALDQVACQAHVNEVIKT
VILHHDNIFPDPLELPGPIYEKCMTGDQYCESPFSEPGGEAEPDGSTETQTSEEEGEAVE
AVARFDYTGRSGRELSFKKGVTLQLFQRASHDWWEGRLNGTHGLVPHQYITLKDRPDSAS
TVDSDSGSTSNDDKRARRELSSPADRQPETYNSSHRRKRTDIFHRPLGRSKDHGNGGVLE
RNSPPVTGHFSPRELLLGRGTGLTPPLDSPERRRRSTAVVTVTVSRHDTLRRPEDTPIRR
SSSGQHGFSSRTLDPDTLAQDIDESVSVALGQLRQLERGGCRPAPDVVLDTLEQVKNSPI
TACSSESPSPHSTPSTPGTPGTPSPLSPLSPLIPLPGPPPAPLRSTNPSPDTLGSFKPVA
GAPLRMGAPLRPPALRPKPLVPPKSNTPPLPPLLDKSCTM
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacctggtcaggagcaagaaggataaagagataattgcagagtatgagagccag
gtgaaagatgtgcgtgcccagctggtggagcagcagcggtgtttggaacagcagaccgag
atgagggtgcagctgctgcaggacctgcaggacttcttcaggaagaaggctgagatcgag
accgagtactccaggaacctggagaaactagccgagaggttcatggccaagacacgcagc
accaaggaccaccagcagtacaaaaaggaccagaacttgctgtctccagttaactgctgg
tacctgctgctgaaccaggtgaggagagagagtaaggaccacgccaccctcagtgacctc
tacctgaacaacgtcatcacccgcctcacccacatcagcgacgactctgcccgcctgctc
aaaagaagtaaagagatcacctttcagctgcaggaggacttgatgaaactccttaatgaa
ctctacaccgtgatgaagacataccacatgtaccatggggagacgttgaacgcggagacc
aagttgagggatgccgagcgtcaggtggggcctggcgggggggtggagccgttattcggc
atgcgtatagaggaacgccaccagagacgcaacgccgtccgcaagatggagaagatgagg
gagaagaggaaggctaagtactctgagaacaagctgaagtctctgaaggccaggaacgag
tacctgctgacgatggaggccaccaactcctccgtgttcaaatactacatccacgacctg
cccgatatcatagactgttgtgacctggggtaccactccagtctgagtcgtgcgttgaag
acctacctgtctgcagagctgagtctggaggcctccaggcggacagggttggaggtactg
gagggggccgtggaaggcctggatcctgcccgagacagacagcgcctgctgggcctctac
cccactgccttctgccccccgccacgcttcagcttccagccccacatgggggacccggtg
acccagatagccgcccagccacaggtgcaggcggagctcgcatctaggctgcagcagctc
cagtcacgcctctccactctgaagatagagaacgaggaggtgaagaagacatggggggcc
actctcaccacccttcaggacatgacagtgctggatgactatgacgtttcccagagtttc
acccacagcccctcttcagagtcagtcaagtccagcgtgtcggacggctacctaaacaaa
cccagcctcgccaagcgccgtgccaaccaacaggagactgagctcttctactttacaaag
ttccgtgagtatctggagggcagtaatttgatctccaaactacaggccaaacacgaccta
ctgaagaaagccatggccgaggggtatatagcagacacgctgactaccagccgtggacga
aataactcccatagcaaacaccaggactcgactaaagccattcctctgctggtggagagc
tgcatccgctacatcaacctccatggtcttcagcaccagggcatattccgtgtgtcgggg
tcgcaggtggaggtcaacgatatcaagaactcatttgagagaggtcacgaccccctgatt
gacgaggagaataaccatgacatcaattctgtggccggtgtgctgaagctctacttccgg
gggctggagaaccccctctttcccaaggaaaggttcaacgacctcatttcctgtgtccgt
aaagagagcctgtatgacagagctcagtgtattcgtaagattctgctgggtgttccacgg
gcgactctggtcgtgatgagatacctgttcgccttcctcaaccacttatcccagtacagc
gatgagaacatgatggatgctgggaacctggccatcgtcttcggccccaccctgctgccc
acgcccgacgccctggaccaggtggcctgccaggcgcatgttaatgaggtcatcaagacg
gtcatcctgcaccacgacaacatcttccccgaccccctggagctgcctgggcccatctat
gagaagtgcatgactggagaccagtactgcgagagtccgttcagcgagccgggtggggag
gcggagcctgacggcagcacagagacccagaccagtgaggaggagggggaagcagtagag
gcggtggccaggtttgactatacgggccggtcggggcgggagctctcctttaagaaggga
gtgaccctgcagctgttccagcgtgcctcacatgactggtgggaggggcgactcaacggc
acccatggcctggtgcctcaccagtacataacactgaaggacaggcctgactctgcatca
acagtggacagcgacagtgggagcactagcaatgacgacaagagagccagaagggagctg
agctctcctgctgacagacagccagagacctacaatagcagccaccgcaggaagcggact
gacattttccaccgccccctcggtcgctctaaagaccatggtaacgggggtgtgttggag
aggaactcgccgcccgtcactggtcacttcagcccacgggagctccttctggggcggggc
actggcttaaccccgcctctcgacagcccagagcgtcgtcgccgttccactgccgtggta
acggttaccgtgagccgccacgatacgctgcgtcggcctgaagacacacctatccggcgc
tccagcagcgggcagcacggcttcagctccagaaccctagacccagacacactggcacag
gacatagatgaaagtgtgagtgtggctctggggcagctgaggcagttggagcgtgggggc
tgcaggccggctcctgacgtggtcctggacactctggagcaggttaagaacagcccaatc
acagcctgctcctccgagtcgcccagcccccacagcaccccctccaccccagggactcct
ggtacccctagtcccctcagccctctgagccccctcattcccctccctggcccccctccc
gcacccctccgatccaccaacccctctcctgacaccctgggctccttcaagcccgtagcg
ggagctccactccgtatgggggctccgcttcgccccccagccctgaggcccaaacccctg
gtgccccccaagagcaacaccccccctctgcccccgctgctggacaagtcctgcaccatg
tga
DBGET
integrated database retrieval system
