Coregonus clupeaformis (lake whitefish): 121544650
Help
Entry
121544650 CDS
T08357
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A-like isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00270
Cysteine and methionine metabolism
cclu01100
Metabolic pathways
cclu04148
Efferocytosis
Module
cclu_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
121544650
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121544650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121544650
03032 DNA replication proteins [BR:
cclu03032
]
121544650
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544650
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
121544650
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121544650
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
121544650
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121544650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_DNMT3
ADDz_Dnmt3b
DNA_methylase
PWWP
SPESP1
DUF4471
Motif
Other DBs
NCBI-GeneID:
121544650
NCBI-ProteinID:
XP_041710595
LinkDB
All DBs
Position
29:8325919..8387171
Genome browser
AA seq
1019 aa
AA seq
DB search
MPSNTVATTNTAAFQSLDYTCDAPGNRMRESTILDKELVPEEKPANSNTTCKEGQPAGRK
HKQIPAEGSVSVKDSVARGGGNSHTGVAAERERTSVSVAQVHNGDVSSGHADRDRDRTQA
DASGCPKQERKAPEKNGLPGAPGSPSAPASQAEEGPPGLPTLLGQSRSLSPPSLENRFLV
SRKPSREPSREPSRDDSDKDKEETLTTPPRKKRGRRKLERPTKYVEQKEEDGGDAVKNQG
VGGPGTGRLRGSVSLRQRPMPRVTFQAGDPYYISKRTREEWLAKWKMEAEKKAQLVSVLN
LMEDHEEMEPEPQQKEEVSVITPHQQQQQQQQQQQQQQQQQQQQQQQQQPTDPASPTVAT
TPEPVPMVGGDKTSPKTAGTEPEYEDGRDFGIGELVWGKLRGFSWWPGRIVSWWMTGRSR
AAEGTRWVMWFGDGKFSVVCVEKLLPFSSFANAFHQPTFIKQPMYKKAIYEVLQVASTRA
GKAFLACPKSDQTDTSKSVDLHNNQMIDWAVTGFQPTGPKGLEPPDEERNPYKEVYPDVW
VEPEAAAYTPPPAKKPRKSTAAEKPKVKEMIDEGTRERLVYEVRQKCRSIEDICISCGSL
NVSREHPLFAGGMCQSCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCV
ECVDLLVGPGAAQIAIKEDPWCCYMCEKGQKGVFGLLERHTDWPCRLQHFFANNHDQDFE
QPKLYPPVMAEKRQPIRVLSLFDGIATGLLVLKELGIQVERYVASEVCDDSITVGIVRHQ
GRIMYVGDVRNVTRKHLHEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLL
HEARPKEGDNRPFFWLFENVVAMGVSDKRDISRFLECNPVMIDAKEVTAAHRARYFWGNL
PGMNRLVRERPLTAMCTDRLDLQDCLEHGRTAKFGKVRTITTRSNSIKQGKDQHFPVFMN
EKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEYFACV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaacactgttgccaccaccaacaccgctgcattccaaagcttagactacacc
tgcgatgcacctgggaacagaatgagggagagcacgatactggacaaggagctggtgcca
gaggagaaaccagctaacagcaacaccacctgtaaagagggccagcctgctgggaggaaa
cacaagcagatacctgcggagggcagtgtgtctgtgaaggacagtgtggccagaggcggg
ggcaacagtcacaccggggtggcagcggagagagagagaacgtctgtgtctgtggcgcag
gtgcacaatggagacgtgagcagtgggcacgcagacagagacagagacaggacccaggct
gatgccagcggctgccccaagcaagagaggaaagctccagagaagaacgggttaccaggt
gcccctggttcccccagtgcccctgccagtcaggctgaagaaggcccccccggactcccc
accctcctgggtcagagccggagcctgagccccccctccctggagaacaggtttctagtg
agccggaagccgagccgggagccgagccgggagccgagccgggacgactctgacaaagac
aaagaggagactctgacaactccgccacgcaagaaacgaggcaggcggaaactggagcgc
ccaacaaaatatgtggagcagaaggaggaggatggaggtgatgcagtcaagaaccaggga
gttggaggccctgggacaggcaggctgcgtggctccgtcagtctgcgtcagaggcccatg
cccagagtaaccttccaggccggtgacccatattacattagcaagaggaccagggaggag
tggctggccaagtggaagatggaggcagagaaaaaagcccaactggtgtcagtgttgaac
ttaatggaggaccatgaggagatggaacctgagccacaacagaaagaagaggtgtcagtc
attacaccccaccagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacagcagcagcagcagcccacggacccagcgtcccctactgtggccacc
acacctgaacctgtccccatggtaggaggggacaagacgtcccccaagactgccggtact
gagccggagtatgaggacgggcgggatttcggcattggggagctggtatgggggaagctg
agggggttttcctggtggcctggtcgtattgtctcctggtggatgaccggacgcagccga
gctgccgaggggacacgatgggtcatgtggttcggtgacggaaaattctcagtggtgtgt
gtagagaaactgttgcctttcagttccttcgccaacgccttccaccagcccaccttcatc
aagcagcccatgtataagaaagccatctacgaggtgctacaggtggctagcacccgagca
ggcaaagccttcctagcctgtccaaagagcgatcagacagacacctccaagtcagtggat
ctacacaacaaccagatgatagattgggctgtgacaggcttccaacccaccggacccaag
ggcctagagccaccagacgaggagcgcaatccatataaggaggtgtaccctgacgtgtgg
gtggagccagaggcggcagcctacacgccccctccagccaaaaagcctcgcaaaagcaca
gcagccgagaaacccaaggtcaaggagatgattgacgaggggacgagagagagacttgtg
tatgaagtgagacagaagtgcagaagcatagaggacatctgcatctcctgtggaagtttg
aatgtttcccgtgaacaccctctgtttgctggaggaatgtgccagagctgcaaaaactgc
tttctagaatgtgcgtatcagtatgacgacgatggttaccagtcatactgcaccatctgc
tgtgggggacgagaggtgctcatgtgtggaaacaacaactgctgcaggtgtttctgtgtg
gagtgtgttgacctactggtggggccaggcgcagcacagatagctataaaagaggatccc
tggtgctgctacatgtgtgagaagggtcagaagggggtgttcggcctgctggagcgtcac
actgactggccatgccgtctacagcacttcttcgctaacaatcatgaccaagattttgaa
caaccaaagctttaccctccagtcatggcagagaagagacaacctattcgtgtcctgtca
ctgttcgacggcatagcaacaggtctgctggtgctaaaggagctgggtatccaggtggag
cgctacgtggcgtcggaggtgtgtgacgactccatcacggttggcatcgtcaggcatcag
ggacgcatcatgtacgtgggcgacgtgaggaacgtcacacgcaaacatttacacgaatgg
ggcccctttgacttagtgattggtggaagtccgtgtaacgacctctctattgtcaaccca
gctaggaagggtctttatgagggcactggtcggctgttctttgagttctaccgcctgctg
cacgaggctcggcccaaagagggcgacaaccggccgttcttctggctctttgaaaacgtg
gtggcaatgggtgtcagtgacaagagggacatctctcgctttctagagtgtaacccggtg
atgatcgatgccaaggaggtgactgctgcccaccgtgcccgctacttctggggcaacctg
cctggcatgaacaggttggtgagagaacgacccttgacggccatgtgcactgacagacta
gaccttcaggactgtttggagcacggcagaacagcgaagtttggcaaagtgaggaccatc
accactcgctctaattccattaagcagggtaaagaccagcactttcccgtcttcatgaac
gagaaggaggacattctctggtgcactgagatggagagggtgtttggcttcccagtccat
tacacagacgtgtccaacatgagtcggctggccaggcaaaggcttctgggaaggtcgtgg
agtgtaccggtcatccgccacttgtttgcaccactcaaagaatactttgcctgtgtttaa
DBGET
integrated database retrieval system
