KEGG   Coregonus clupeaformis (lake whitefish): 121550241
Entry
121550241         CDS       T08357                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03020  RNA polymerase
cclu03420  Nucleotide excision repair
cclu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121550241 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121550241 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    121550241 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121550241 (polr2f)
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121550241 (polr2f)
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121550241 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     121550241 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     121550241 (polr2f)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121550241 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 121550241
NCBI-ProteinID: XP_041718345
LinkDB
Position
Unknown
AA seq 127 aa
MSDNEGDFDDGDFDDAEEDEGLDDLENVEDEDQENVQILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattttgatgatggagacttcgatgacgctgaagaggatgag
ggattagatgacctggaaaacgttgaagatgaggaccaggagaatgtgcagatcctgcct
gcaggggaggggtcgcaggccaaccagaagaggatcacaacccaatacatgaccaaatat
gagagggccagggtgctggggacacgtgcactccagatagcgatgtgtgccccagtcatg
gtggagctggagggagagacagaccctctgcaaattgctatgaaagagctaaagtgcagg
aagattcccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgt
gacgagctcatcatcacagactga

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