Coregonus clupeaformis (lake whitefish): 121550285
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Entry
121550285 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00052
Galactose metabolism
cclu00511
Other glycan degradation
cclu00531
Glycosaminoglycan degradation
cclu00600
Sphingolipid metabolism
cclu00604
Glycosphingolipid biosynthesis - ganglio series
cclu01100
Metabolic pathways
cclu04142
Lysosome
Module
cclu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121550285
09103 Lipid metabolism
00600 Sphingolipid metabolism
121550285
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121550285
00604 Glycosphingolipid biosynthesis - ganglio series
121550285
00511 Other glycan degradation
121550285
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121550285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121550285
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
121550285
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121550285
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
YfzA
Motif
Other DBs
NCBI-GeneID:
121550285
NCBI-ProteinID:
XP_045066668
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All DBs
Position
35:complement(780318..788773)
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AA seq
650 aa
AA seq
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MVCSRVGVVLLYSLFASTLGVPQTFSVDYKNDCFRKDGEEFRYISGSIHYNRIPRAYWKD
RLLKMYMAGLNAIQTYVPWNFHEPTSDQYNFSGDRDLEHFLQLAQDIGLLVVLRPGPYIC
GEWDMGGLPAWLLHKKDIVLRSSDIDYIAAVDKWMGKLLPMIKPFLYQNGGPIITVQVEN
EYGSYFACDYNYLRHLTSLFRSHLGNDVVLFTTDGAGVGYLKCGSLQGLYATVDFGPGGN
VSAAFDAQRQAEPHGPLVNSEFYTGWLDHWGEHHSTVSTAIVAKSLNEILAIGASVNLYM
FIGGTNFGYWNGANSPYAXQPTSYDYDAPLTEAGDLTDKYFAIQDVIKMYRKIPEGPVPP
STPKYAYGAVPMKKLHTVVDALDILSFSGPVKSLYPLTFIEMNQPFGFVLYRTKLPVDCS
KPTPLSSPLNGVHDRAYVSVDGVAAGILARDKALTINVTGKAGSQVDILVENMGRVNYGK
DINDFKGLVSNLTLGADILTGWAVYSLSIDQAVSQGLLWEMGSREAGPPPPSPLSVPSFY
GGTFVIPGGIPDLPQDTYIQFPDWRKGQVWINGFNLGRYWPARGPQITLYVPASILSTAA
PNNVTVLELEGDPCTPGPCTVEFANTPVLNATVKSDHKHQRALFHKEDLL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggtttgctcaagagttggagttgtgctactgtattccctctttgcaagtacacttggg
gtgccgcagaccttcagtgtggactacaagaacgactgcttccgtaaggatggggaagag
ttccgctacatctccggtagcatccactacaacaggatccccagggcctactggaaagac
aggctactcaagatgtatatggccggactgaacgccattcagacgtacgtcccctggaat
ttccacgagcccacctcggatcagtacaacttcagtggggacagggatctagaacacttc
ctgcagttggcccaagacattggtctgctggttgtactgaggcctgggccctacatctgt
ggagagtgggatatggggggcttgcctgcctggctgctccacaagaaagacattgtccta
cgttcctcagatatagattacattgcggctgttgataagtggatgggcaagctactgcca
atgataaaaccgttcctttatcagaacggtggacccatcatcactgttcaggtggagaat
gagtacggcagctactttgcctgtgactacaactacctgcgtcacctgaccagtctgttc
cgctcccacttggggaatgacgtggtgctgttcaccacagatggggctggggtcgggtac
ctcaagtgtggctctctgcagggcctctacgccactgtggattttggcccaggtgggaat
gtgtctgctgcatttgatgcccagagacaggcagagccccatggacccttggtgaactct
gagttctacaccggctggctggaccactggggagagcatcactctacagtgtccaccgcc
atcgtggccaagtccctcaacgagatcctcgccatcggagccagcgttaatctatacatg
tttattggaggaaccaattttggatactggaatggtgccaatagcccctatgccnnccag
cctactagttatgactatgacgctccactcactgaggcaggagacctcactgacaaatat
tttgccatccaggatgtcatcaaaatgtatcggaagataccagagggacccgtgcctcca
tcaacacctaaatatgcctacggagctgtgccaatgaagaagcttcacacagtagtcgat
gctctagacatactgtccttctccggtccggtgaaaagcctctacccgttgaccttcatt
gagatgaaccaaccgtttgggttcgtcctctatcggaccaagctgcctgtggactgcagt
aagcccacccctctctcctcaccactgaatggagtccatgatcgggcatatgtatcagtc
gacggggttgctgctgggatcctagcgagggacaaggccctgaccattaatgtgactggg
aaggctgggagtcaggtggacatactggtggagaatatgggccgagtcaactatgggaaa
gacatcaacgactttaagggcctggtgtctaacctgacattgggggccgacatcctcacc
ggctgggctgtctacagcctcagcatcgaccaggctgttagccagggtcttctctgggag
atgggctctagggaggctggtcctccaccaccctcacccctctccgtcccctccttctat
gggggcactttcgtcatccccggtggcatcccagatctgccccaggacacctacatccag
ttccctgactggagaaagggccaggtgtggatcaacggtttcaacctgggccgctactgg
cccgctcgcggcccacaaatcaccttgtacgtgcccgctagcatcctgagcacggccgcg
cccaacaacgtgaccgtcctggagctggagggggacccatgcacccccgggccctgtacc
gtggagttcgccaacaccccggtcctgaacgccaccgttaagtctgaccacaaacaccag
agggcgctgttccataaagaggatctcttatga
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