Coregonus clupeaformis (lake whitefish): 121551560
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Entry
121551560 CDS
T08357
Name
(RefSeq) zgc:123305 isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00561
Glycerolipid metabolism
cclu00564
Glycerophospholipid metabolism
cclu01100
Metabolic pathways
cclu04150
mTOR signaling pathway
Module
cclu_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
121551560
00564 Glycerophospholipid metabolism
121551560
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121551560
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121551560
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
121551560
Protein phosphatases and associated proteins [BR:
cclu01009
]
HAD phosphatases
Other HAD phosphatases
121551560
BRITE hierarchy
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
121551560
NCBI-ProteinID:
XP_041720198
LinkDB
All DBs
Position
12:31746609..31782668
Genome browser
AA seq
1100 aa
AA seq
DB search
MNYVGQLAETVFVTVKELYRGLNPATLTGAIDVIVVRQPDGSLQCSPFHVRFGKLGVLRS
KEKVVDIEINGEPVHLQMKLGDNGEAFFVEENEDFESRVPAHLCTSPIHIELPEGSEETF
EGLPSSGSTRRKKRRRKRIRSDSHLREDGSSSSDEREREQSGEQEEEEPTTPMLASKSVY
FSLSEEPHEELVVMQIRDVHPHSDGEGSPSESVFYSRPSSPKSDSELLVKPPESSGPQMQ
WNWGGFPEMCPTERGRVEVQHVSPGVRCSDSSHFRTIKRQDSFDMGLEPVVSCVRASSSV
AVVVRPMPRTGPAVQPTESSPIDLERASNMAHSTPNHPTSELLSEPLTLASLAMASIDSP
QAPGPRKMETQPQVETQQAGDEVAEESPSNPELEDSINSLANKISIANVGDTDRQASEVS
TANVECVANMVSQVENDCIDTHIPSRKGSKAATISADRLASNSTATLALTNKARLANTTS
YASAANLGPITTECLGSRAHPDHHSAFPEPNGQGPGVVLSEGDSGIEPCTEGGEETENGV
VMTSRATDHSLTNQAAESIGVTDVLATEALREEQSSSAEHQDKKKGKRSQHLGPSDIYLD
DLSNLDPEVAALYFPPKSEAEGCSRPGAEQGSSSGNQSPQSVGSGAMDSGTEYLSDSTTD
HLDVSMSLCGRTGHTSQINKDQFMEHVVNYQDMVSNPGIIEDPNLVICINSKYYNWAVAA
PMVLSMQVFQKNLPKSAIDQLVKDKMPKKSGRWWFSWRRKDMDTNPNQTGENSKQDQEEA
HAETEVSTSVSVTGPSTNILATLDDLTSDEEAGLGRVGNLSSETLETINTGQCFSHMYRK
SLRLTSEQIEQLNLREGANKVMFSVTTQYQGTCRCEAAIYLWNWDDRVVISDIDGTITKS
DALGHILPQLGKDWTHHGIARLYHKIHQNGYKFLYCSARAIGMADITKGYLQWVNDKGTV
LPKGPVLLAPSSFFSALHREVVEKKPEVFKIACLTDIRDLFNPQRQPFYAAFGNRTNDAY
AYKEVGVRDTRIFTVNPKGELIQEKNKGNKSSYTHLSELVEHFFPMISEDGMSSSFDCPE
FSHFSYWREPLTPLDLSSLD
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtggggcagctggcggagactgtgtttgtgacggtcaaggaactataccgg
ggccttaacccggccacgctcacgggggccatcgatgtcatcgtggtgcgccagcccgac
ggcagcctccagtgctcgccgttccatgtgcgcttcggcaagcttggggtgctgcgctcc
aaggagaaagtggtggacattgagatcaatggggagccagttcacctgcaaatgaagctg
ggggacaacggagaagctttttttgtggaggaaaatgaggattttgagtccagagtgcca
gcccacctctgcacgtcgcccatccacatcgagctgccggagggttccgaggaaaccttt
gaggggctccccagttccggaagcacacgaaggaaaaagcggcggcgcaaacgcatacgc
tccgactcccacctaagagaagatggtagctcctcgtccgacgagagagagagggagcag
tcaggagaacaggaagaagaagagcccaccacgcccatgctcgccagtaagtctgtgtac
ttctcgctgtctgaggagccacatgaagagttggtggtcatgcagatcagggacgtccac
cctcactcagacggagaggggtccccctcagagagtgtgttctatagtcgtccttcctcc
cccaagagtgactctgagctgctggtgaagcctccggagtcttcagggcctcagatgcag
tggaactggggcggctttcccgagatgtgtccaacggagagagggagggtggaggtgcag
catgtctcccctggcgtccgctgctccgacagctcccacttccgcaccatcaagcggcag
gattcctttgacatgggcctggagcccgtggtcagctgtgtccgagcgagcagtagcgtg
gcggtggtggtcaggcccatgcccaggaccggaccagcggtccaacccacagaaagttcc
cccatagacctggagagagcctccaatatggcccactccaccccgaatcaccccacctca
gagctgctctcagagccgctaacattggcatcattagcgatggctagcatagactcgccc
caagccccagggcctagaaaaatggaaacgcagccacaagtagagacccagcaggcaggg
gatgaagtagccgaggagtccccatccaacccggagctggaagactccataaactccctg
gctaacaaaattagcattgctaatgtaggcgatactgatagacaagctagcgaagtaagc
acagcaaatgttgaatgtgtagctaacatggttagccaagttgaaaacgactgtatagac
acacacatcccatccagaaaaggtagcaaagctgccacaatcagcgcagacaggctagct
agcaacagcacagctactttagctttaactaacaaggctagattggctaacacaactagc
tatgccagtgcagccaacttaggtcccattaccacagagtgtctgggtagcagagcacac
ccagaccatcacagtgcctttccagaacccaatggacaggggccaggagttgtcttgagt
gagggcgacagcgggattgagccctgcaccgagggaggggaggagacagagaacggagtt
gtaatgacgtccagagccacagaccactccctgaccaatcaggctgcagagagtattgga
gtgacagatgtgttagccactgaggctctgagggaggagcagtctagctcagcagagcac
caggacaagaagaaaggtaaacgcagtcagcacctgggaccctccgacatctacctggat
gacttgtctaacctggacccagaggtggcagcactctacttcccacctaaaagtgaggca
gaaggatgctcgcggcccggtgcggagcaagggtccagttctggtaaccagtctccacag
tcggtgggcagtggggccatggacagcggcacagagtacctgtccgactctaccaccgac
cacttggatgttagcatgtccctctgcggccgcaccggccacaccagccaaatcaacaaa
gatcagtttatggaacatgttgtgaactaccaggatatggtgagcaaccctggaatcatc
gaagatccaaacctggttatctgcatcaactcaaagtattataactgggcagtggctgcc
cctatggtcctgtcaatgcaagtttttcaaaagaatctaccaaagagtgccattgaccag
ctggtgaaggacaagatgcccaaaaagtctggccgctggtggttctcctggaggaggaag
gacatggacactaacccaaaccagactggagagaactctaagcaggaccaagaggaggca
catgcagagactgaagtctcaacctctgtgtctgtcactggtccctcaacaaacatactg
gcgactctggatgacctgactagtgacgaggaggcgggcctaggcagagtgggcaaccta
tcatcagagaccttagagaccataaacactggccagtgttttagccacatgtaccgcaag
tccctacgcctcacctccgaacagatagagcagttgaacctgcgtgagggggccaacaag
gttatgttcagcgtgaccactcagtaccagggcacctgtcgctgcgaagccgccatctac
ttgtggaactgggacgaccgcgtcgtcatctcagacatcgatggcaccatcacaaagtct
gatgccctgggtcatatcctacctcagctggggaaagactggacacaccacggcatcgcc
cgtctctaccacaaaatccaccaaaacggctacaagttcctgtactgttcggcacgggcc
atcggcatggccgacatcaccaagggctacctgcagtgggtgaacgacaaaggcactgtc
ctccccaagggccccgtgctgctggcccccagcagtttcttctctgccctgcacagagag
gtggtagagaagaagccggaggtgttcaagatcgcctgcctcactgacatccgagacctg
ttcaacccccagaggcagcccttctatgcagcctttggtaacaggaccaatgatgcctat
gcttataaggaagtgggtgtccgtgacaccaggatcttcactgtgaaccccaagggagaa
ctcatccaggagaagaacaaaggcaacaagtcctcgtacactcacctgagcgagctggtg
gaacacttcttccctatgatctctgaggatgggatgtcgtcctccttcgactgccctgag
ttcagccacttctcctactggagagagcccctaacaccactggacctgtcctctctggac
tag
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