Coregonus clupeaformis (lake whitefish): 121551977
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Entry
121551977 CDS
T08357
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00780
Biotin metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
121551977
Enzymes [BR:
cclu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
121551977
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
121551977
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
121551977
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
121551977
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
121551977
NCBI-ProteinID:
XP_041720593
LinkDB
All DBs
Position
35:7144650..7182570
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AA seq
950 aa
AA seq
DB search
MLITLCYVYLWVRFQKCYTVVIRSTLHRLCGGSKSRASNVSFTFCALNPLGKPRLQKGQP
TCQQSVNKQLSPPLPEEDVFLKLGDKAIYITEPQACDDLSKWTLLWGSSLSCGPRIENIS
FIIEATSGQRVGSQAHHHTTEKKKVLKWSDYCLPLACSPVQPFRAVAQASVDNFSRLGVA
FMEDRLQLDNGLVPSKIVSVLLRESAFKELLEKGKSEKHITSLSLKKQTEIILSEPSPCE
WEVLSVRGDPKLTQHRKGSLLLPPEIQRALGERRGSEPLRGASPGVDSGDISLGINHQHM
EGHGHHLHLSSCHECQELENSTILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEA
ESFVGQSRRVNVTGKPPNVLVFTGGCQERFQRVHSLLGECIDMDSYTVYPLRPQQALSEP
WLGSAALLVLASDEPLTPQLQARFLAYLEQGGRILGLSSTLCPTGLALVPRKSRRSQICR
LSFTKADTTELDLSVLASGSVFVREPQSGGGGDPGETEFWGELKWDGDGGDKDMVIVRVT
RGEDGGEAVLCQVHLETAPNSEDIVSSQGFDELKMSNARRYEVLTEIFTSLGLSCELSQA
TPASPVYLLATSEERRASFLKWLYTQVDKEGLLKSSKAFLKVIPSAELQAGPPLLPKGTL
ALVTDPPEAQSWEQFSLQTYSQHLETRTLGRTLLYAQVTPTTMDLLEGLMLQLPEEMGLM
AVAARQTQGRGRGGNAWLSPLGCAMFSVHVQVAVRSRLGQRIPFLQHLAALAVVEAVRTL
PGYQDIDLRVKWPNDIYYGNLMKLGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDL
VMQHNRERGTSLEALSSAQLIGRTLTSLEQLISDFQERGSEAVLPLYYKRWVHSGTQVRL
WSEDGPQAVVVGLDDNGFLQVRSEEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagta
gttattcggagcaccctgcacagattgtgcggggggagcaaaagcagggccagtaacgtt
agcttcacattctgtgccttgaatccactcgggaagcctcgacttcagaaaggacaacca
acctgccagcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgatgacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccgcggatagagaacatttct
ttcatcatagaggctacgtcaggacaaagagtgggcagccaggctcatcatcacactaca
gaaaagaaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccagtg
cagccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcg
tttatggaagatcgccttcagctggacaatggactagtgccttcaaagatagtctctgtc
ctgctccgagaatctgcattcaaagaacttttggagaagggaaagtcggaaaagcacatc
acttccctctccctcaaaaaacagactgagatcatcctctctgagccttctccctgcgag
tgggaggtactctcagtgagaggcgaccccaagctaacacaacacaggaagggcagcctg
ctcctaccgccggagatccagagggctttaggggagagacgaggctcagagcccctacga
ggagccagccctggggtggacagcggggacatctccctgggcatcaaccaccagcacatg
gagggccacggccaccacctccacctgtccagctgccacgagtgccaggagctggagaac
agtaccatcctctccgtcaagtacgcctcggtcgacaacatccctgaccttcccgacgac
tacgccacgtgcacggacagcggggacgagactctggacgagttcgaggaggatgaggca
gagagctttgttggtcaaagccggcgggtcaacgttaccgggaagccccccaacgtgctg
gtgttcacgggcggctgccaggagaggttccagagggtgcattcgctgctgggcgagtgc
atcgacatggacagctacacggtgtaccccctgaggccccagcaggccctcagtgaaccc
tggctggggagtgctgccctgctagtgctggcctcagacgaaccccttaccccccagctc
caggcccgtttcctcgcatacctggagcagggtggcaggatcctgggactctcctccacc
ctctgccccacggggctggccctggtgcccaggaagagtaggaggagccagatctgcagg
ctgagcttcaccaaggctgataccacagagctggatctgagcgtgctggccagcgggagt
gtgtttgttagggagccccagagtggtggtggtggtgaccctggagagacggaattctgg
ggggagctgaagtgggacggggatggtggggacaaggacatggtcatcgtcagggtgacg
cgtggagaggacggaggggaggccgtgctgtgtcaggtgcacctggagacggctcccaac
tctgaggatattgtgtcgtctcagggttttgacgagctgaagatgagcaatgcgcggcgc
tacgaggtcctgacagagatcttcacctccctgggcttgagctgtgagttgagtcaggcc
acgcccgccagccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctc
aagtggctgtacacccaggtggacaaggaggggctgctcaagtcctccaaggccttcctc
aaagtgatccccagcgcggagctccaggctgggccacccctgctgcccaaagggaccctg
gccttggtcacggaccccccagaggcccagagttgggagcagttcagcctgcagacctac
agccagcacctggagacccgcacgctgggacgcaccctgctctacgctcaagtcaccccg
accaccatggacctactagaggggttgatgctccagctgcctgaggaaatggggttaatg
gctgtagctgctcgacagacccagggtagaggccgcggggggaatgcgtggctgagtcct
ctgggatgtgctatgttcagtgtgcatgtgcaagtggctgtgcgctccagactaggccag
aggatccccttcctgcagcacctggctgccctggccgtggtggaggccgtacgcaccctt
cccggttaccaggacatcgacctaagggtgaagtggcctaatgacatttactatggtaac
ctgatgaagctaggaggagtgttggtgacatcaacagtcatgggaccaaccttccatctc
ctcattggctgtggctttaacgtcagcaacagcaaccccaccattgccattaacgacctg
gtgatgcagcacaaccgagagcgcggcacaagcctggaggcccttagctcagcccagctc
atcggccgcaccctcacctccctggagcagctcatctctgacttccaggaacgggggtca
gaggccgtcctacccctctactacaagagatgggtgcacagtgggacccaggtgcgtctg
tggagtgaggacggcccccaggctgtcgtggtgggcctcgacgacaacggcttcctgcag
gtgcgctccgaggagcagggcgtggtctccgtgcagcctgacggcaactccttcgacatg
ctgaggaacctggtggtcaccaagcaacgctag
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