Coregonus clupeaformis (lake whitefish): 121553724
Help
Entry
121553724 CDS
T08357
Name
(RefSeq) bone morphogenetic protein receptor type-1A isoform X1
KO
K04673
bone morphogenetic protein receptor type-1A [EC:
2.7.11.30
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121553724
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121553724
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121553724
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121553724
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.30 receptor protein serine/threonine kinase
121553724
Protein kinases [BR:
cclu01001
]
Receptor serine/threonine kinases (RSTK): TKL group
TGFBR1 family [OT]
121553724
CD molecules [BR:
cclu04090
]
Proteins
121553724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Activin_recp
TGF_beta_GS
Pkinase_fungal
FTA2
PRIMA1
Motif
Other DBs
NCBI-GeneID:
121553724
NCBI-ProteinID:
XP_041722991
LinkDB
All DBs
Position
37:complement(12956579..13029722)
Genome browser
AA seq
532 aa
AA seq
DB search
MTVLPFYIAAVGVCILLVIRAECIQTGQNPDHMLHGTGHKHESRKHGDDSTVAPEDAARF
LSCYCSGHCPEDHKNNTCETNGQCFAIIEEDDNGEAILTSGCMKYEGSHFQCKDSPKAQT
RRTIECCGTDFCNRDLQPTLPPPMDTGSYFGSAHWLAFLISMTVCCCTLICITVVCYYRY
KWQTERQRYHRDLEQDEAFIPVGESLKDLINQCQSSGSGSGLPLLVQRTIAKQIQMVRQI
GKGRYGEVWLGRWRGEKVAVKVFFTREEASWFRETEIYQTVLMRHENILGFIAADIKGTG
AFTQLFLITDYHENGSLYDYLKFTTLDTQSLLRLVYSAACGLCHLHTEIYGTQGKPAIAH
RDLKSKNILMKKNGTCCIADLGLAVKFNSDTNEVDVPLSTRVGTRRYMAPEVLNETLNKN
HFQAYIMADIYSYGLIIWEIARRCITGGIVEDHQLPYCDMVPSDPSFEDMLEVVCVKGLR
PTVSNRWNSDECLRTMLKLMSECWAHNPASRLTILRVKKTLAKMVESQDIKM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcttcccttttacatcgctgcggtgggagtctgcatcctactggtgatcaga
gctgaatgtattcaaactggtcagaatccagaccacatgctccatggcaccgggcacaag
catgagtccaggaagcacggggacgactccacggtggccccagaggacgccgcccgcttt
ctgagctgctactgctcgggccactgtccagaggaccacaaaaataacacctgcgagacg
aatggccaatgttttgccatcatagaggaggacgataatggagaagctattctgacttct
ggctgcatgaagtatgaaggctcacattttcaatgcaaggattctcccaaggctcagaca
aggcgaacgatcgaatgctgtgggacggacttctgtaatcgggacctgcagcccacgtta
cctcccccaatggacactggttcctactttggcagtgcccactggctggcgttccttata
tcaatgactgtatgctgctgcactctcatctgcatcacggtagtctgttactacaggtac
aagtggcagacggagcggcagcggtaccatcgggacctggagcaggacgaggccttcatc
cctgtgggagagtctctcaaagacctcatcaaccagtgccagtcatctggcagtggctct
gggctccccctgctggtgcagcgcaccattgccaagcagatccagatggtgcgtcagatc
ggcaaggggcgctacggcgaggtgtggctgggtcgctggcggggagagaaggtggccgtc
aaggtgttcttcacccgggaggaggccagctggttcagagagaccgagatctaccagaca
gtcctcatgaggcacgagaacatactaggtttcattgcggcagacatcaagggtactggg
gccttcacacagctcttcctcatcacagactaccatgagaacggctccctgtatgactac
ctgaagttcaccacgctggacacccagagcctgctgcgactggtctactctgctgcctgc
ggcctgtgccacctccacacagagatctatggcacccagggcaagccggccatcgcccac
cgagacctaaagagtaagaacatcctgatgaagaagaacggcacctgctgcatcgccgac
ctgggcctggccgtcaagttcaacagtgataccaacgaggtagacgtccctctgagtaca
cgggtggggacccggaggtacatggccccagaggtgctgaacgagaccctgaacaagaac
cacttccaggcctacatcatggctgatatatacagctacggtctcatcatctgggagatt
gcccgccgctgtataacaggaggtatagtggaggaccaccagctgccatactgtgatatg
gtaccgtcagacccgtcctttgaggacatgctggaggtggtgtgtgtcaaagggctgcgg
cccaccgtgtccaacaggtggaacagtgacgagtgtctgaggaccatgctgaagctgatg
tctgagtgctgggcccacaaccccgcctcgcgcctcaccatcttacgagtcaagaagacc
ctggccaaaatggtggaatcacaggacatcaaaatgtga
DBGET
integrated database retrieval system
