Coregonus clupeaformis (lake whitefish): 121554973
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Entry
121554973 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554973
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121554973
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
121554973
NCBI-ProteinID:
XP_041724643
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Position
40:complement(2995414..3060181)
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AA seq
1075 aa
AA seq
DB search
MLSNTGVYAVKKRKKPVQKTKKTPDVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVRSRL
DKLSVLRLGVGYLKVKSFFKATMKKSSVLFPSGNGLNMNGMNATHFSEGDLLLQALNGFV
MVVTAEGHVFYASATIQDYLGFHQSDVVHQSVFELIHTDDRAMFRRQLHFALNPKAFDPE
QGGDGMESSSDITRNIVSYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGRLK
FLHGQSMLGEDGTLSQPRLGLFTIATPVQTPSILEIRTKTIFFQTKHKLDFTPTGVDARG
KVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQKTGCWVWVQ
ANARLVYKGGRPDFIIARQRALLNSEGEENLRQRKMQLPFSFTTGEALLYETGPTLDATE
FQTNPPKIRKVESLDPQSLLGSLLKQDESIYTQPQEPQLPIDQVFMDSRALTNVACNSWQ
TIMEAQGPDGDDDDGDGPREVKQEGALVAMIDTLEKMARDGELCAALQGRSVELMEWESV
LLRLSQDSSGSGDTPLDLDDIMTNDIFSYVEDTLFKESSEGIGYQPNCSTMVNNNPNLFT
GVLNDNNQGGPFTGVVSPTGAGQCKPGLLNNCSFFHNGSPVNGLNGISHSQITGNRAVGL
AGQNQAGQNQAGQIQAGQNQAGPQQVFKSTQRLSHFGPQIPQILQTGLNIPTLQQLQLND
IVSPSLELPELNIPHSSGQNGSVTFSMVGSCAQAPNNHMGSPQIIAGQVQSNQPPPQHFP
HNGLPAAMAPNVPEKISVPQSNHVAPILMDAWASLIPSNGFVSPQIESSNLNQSNPLLTA
CLQGNSAPFQSLKTQKVQQWPQNQNQHQQQQLPPPVSTMQDGTMQNGHRFIPDCHSQATE
TQRVPLTGLWPQNTNGLYHQLQQGGLANGQPAPSSSCMFENVSHPLPNGNSHVDGTRLPP
TLSVCQRRIGDHQDQSPPQGSCYFQWGPSEPVVGTSAIIQDNARISSLSHPLVANITTPE
DLLAMQQCLAGCNRVGQTQIPSLPVVDSNGTFSLPPLVNGTMCFTEHNQTNYCDF
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacactggagtctatgctgtcaagaagcggaagaagcccgttcaaaaaact
aagaaaactccagatgtggtcaagtcgaacccatccaaacgccaccgggatcggctgaac
ggggagctggacaggctgacgggcctcctaccattccctgaggatgtgcgctctcgcctg
gacaaactctccgtgctccgcctcggcgtcggctacctgaaggtgaagagcttcttcaaa
gcaaccatgaagaaaagcagtgtcctgtttcccagtgggaatgggctgaacatgaatggg
atgaacgccacacacttctccgagggggacctactgctccaggctctgaatggctttgtg
atggtggtcacagctgagggacatgtgttctatgcctctgctactatccaagactacctg
ggcttccatcagtcagatgtggtccaccagagtgtgtttgagctaatccacacagacgac
agagccatgttcagacgacagcttcactttgccctcaaccccaaggcctttgacccagag
cagggaggagacggcatggagagcagcagtgacatcaccaggaacatcgtgagctataac
cctgagcagctccccccagagaactcctccttcctggagaggaactttgtgtgtcgcttc
cgctgcctcctggacaactcctctggcttcctggctctgaacttccaggggcgtctgaag
ttcctccatggccagagcatgctgggggaagacgggacgctcagccagcccagattgggc
ctgttcaccatcgccacccctgtccagaccccgtccatattagagatcaggaccaagaca
atcttcttccagaccaaacacaagcttgacttcacccccacgggtgtcgatgccaggggg
aaggttgtcctgggatactcagagatggagttgtgtatgagaggctctgggtatcagttc
atccacgctgctgatatgatgtactgtgcagacaaccacgtcagaatgattaagacagga
gagagtggtctgaccacgttcagactgctgcagaagactgggtgctgggtctgggtccag
gcaaacgccaggctcgtctacaaaggaggaaggcccgacttcatcatcgcacgccagaga
gctttacttaattctgagggagaggagaatctacgtcagaggaagatgcagctgcccttc
agcttcaccaccggggaggccctgctgtacgagaccggccccactctggacgccactgag
ttccaaaccaaccccccaaagatccgcaaggtggagtccctggacccccagtctctgctg
ggctccttactgaagcaggacgagtccatctacacccagccccaggagcctcagctaccc
atagaccaggtattcatggacagccgagcgctgaccaacgtggcctgtaactcctggcag
actatcatggaggcccaggggcccgacggagatgatgatgatggtgacggccccagggag
gtcaagcaggagggggcgttggtggccatgatcgacaccctggagaagatggcgcgggat
ggggagctgtgtgcggcgctgcaggggaggagcgtggagctgatggagtgggagagcgtc
ctcctcaggctgagccaggactccagcgggagcggggacacccccctagatctggatgac
atcatgaccaacgacatcttctcttatgtggaggacaccttgttcaaggagagcagcgag
gggatcggttaccagcccaactgctccaccatggtcaacaacaaccctaacctgttcaca
ggggtgctcaacgacaacaaccagggtggaccattcacaggagtggtcagccctacaggt
gccggacagtgcaagcctgggttgcttaacaactgcagctttttccataatggctcccca
gtgaacggtctaaatggtatcagccacagtcagataacaggcaacagagcagttggtttg
gcaggacagaaccaggcaggacagaaccaggcaggacagattcaggcaggacagaaccag
gcaggaccacagcaggtgttcaagagcacccagaggctctcccacttcggcccccagatc
ccccagattctccagacgggcctgaacatccccaccctgcagcagctacagctcaacgac
atcgtcagcccctctctggagctcccagagctcaatatcccacacagctcaggccagaat
gggtctgtcacgtttagcatggttggatcctgtgctcaggcaccaaacaaccacatggga
agccctcagatcatcgctggccaggtccaatctaaccagccacctccacagcatttccct
cataatggcttgccagctgcaatggcaccaaacgtaccagagaagatctctgttccacag
tccaaccatgtagcacctattctgatggatgcttgggcatccttgattcctagtaatggc
tttgtttcaccccagattgaatctagcaatctcaatcaatcgaatccccttctgactgct
tgcctgcagggaaacagtgcaccatttcagtcactcaaaacccagaaagtacagcagtgg
ccccagaaccagaaccagcaccagcagcagcagctgccaccccccgtcagcacaatgcag
gatggaacaatgcagaatggacaccgattcatcccagactgtcacagtcaagccacagag
acccaaagagtccctctcacaggcctttggccacagaacaccaacggattataccaccaa
ctccagcaggggggattggccaatggccagcctgctccatccagcagctgcatgtttgag
aatgtctcacaccccctccccaacggaaacagccacgtggatggcaccaggctgcccccc
actttgtctgtgtgccagagaaggataggtgaccaccaggaccagagtcctccccaggga
tcctgctacttccagtggggccccagtgagccggtggtgggcacgtcagccatcatccag
gacaatgccagaatcagctccctgtctcacccgctggtggccaacatcaccacccctgag
gacctactggccatgcagcagtgcctggctggatgcaacagagtcggacagacacagatc
ccaagccttcctgtagtagacagcaatggaacattctccttacccccccttgtcaatgga
accatgtgctttacagagcacaaccaaaccaactattgcgacttctaa
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