Coregonus clupeaformis (lake whitefish): 121566913
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Entry
121566913 CDS
T08357
Name
(RefSeq) melatonin receptor type 1B-B-like
KO
K04286
melatonin receptor type 1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121566913
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121566913
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
Melatonin
121566913
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
TctB
DUF4233
Motif
Other DBs
NCBI-GeneID:
121566913
NCBI-ProteinID:
XP_041732763
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Position
5:34791952..34843855
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AA seq
367 aa
AA seq
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MTRTGRTKIGSPKVFDMPENVSFSRNRTELDARPGARPAWAITVLASVLIFTTVVDVLGN
LLVIISVLRNRKLRNAGNVFVVSLAFADLVVAFYPYPLVLYAIFHDGWSLGETQCKVSGF
LMGLSVIGSIFNITGIAINRYCYICHSFAYDKLYSYRNTLLLVGLIWLLTILAIIPNFFV
GSLQYDPRVYSCTFAQAVSTSYTITVVVIHFFVPIAVVTFCYLRIWILVIQVRRKVKSEA
KPRLKPSDMRNFITMFVVFVLFAICWAPLNFIGLAVAIDPETVAPRIPEWLFVVSYFMAY
FNSCLNAIIYGLLNQNFRKEYKRIIMSVWMPGLFFQEASQGGTEGMRSKPSPRLGLNNND
HVKGEAL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcggacggggaggacaaaaattggtagccctaaggttttcgacatgccagagaat
gtttcgttctccaggaaccgcaccgaactggacgcgcggccgggggcgcgtccggcatgg
gctatcacggtgctggccagcgtgctgatcttcaccacggtggtggatgtcttgggcaac
ttgctggttatcatttcagtgcttaggaaccggaaacttaggaatgcggggaacgtgttt
gtggtgagcctggcctttgctgacctggtggtggccttctacccctaccccctggtgctc
tacgccatcttccatgacggctggtcgctgggagagacacagtgcaaagtcagtggtttc
ctgatgggcctgagtgtcatcggctccatcttcaacatcaccggcatcgccattaaccgc
tactgctacatttgccacagctttgcctatgacaagctctacagctaccgcaacaccctc
ttactggtggggctcatctggctcctcaccatcctggccatcatacccaacttcttcgta
gggtcgctccagtacgaccccagggtgtattcgtgtacctttgctcaggccgtcagtaca
tcgtacaccatcactgtggtggtgattcatttcttcgtgcccatcgccgtggttaccttc
tgctacctgaggatctggatcctggtcatccaggtgaggaggaaggtgaagtcagaggcg
aagccccgcctcaaacccagcgacatgcgcaacttcatcaccatgttcgtggtgttcgtg
ctcttcgccatctgctgggcgccgctcaacttcatcggcctggccgtggccatcgacccg
gagacggtggcgccacggatccccgagtggcttttcgtggtcagctacttcatggcgtat
ttcaacagttgccttaacgccatcatctacggcctgctcaaccagaacttccgtaaggaa
tacaaacggattatcatgtccgtgtggatgcctggtctgttcttccaggaggcgtcacag
gggggcacagaaggtatgaggagcaagccctcgcccagactgggactcaacaacaacgat
cacgtcaagggagaggctttatga
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