Coregonus clupeaformis (lake whitefish): 121567474
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Entry
121567474 CDS
T08357
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121567474
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121567474
BRITE hierarchy
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121567474
NCBI-ProteinID:
XP_041733473
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All DBs
Position
6:46449825..46463823
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AA seq
644 aa
AA seq
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MEMKQSMMMDREKEGGQKEKGEETSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGFP
TSTAQSPKEGAGGVPAGALRTLVVQQTSLDRPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTST
SPAEEFYTRQVLQVHMSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALMTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVENVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
HMMLGFSPGLFWKVCWVAICPIFLLFIIVSFLAFPPEVKLFDYVYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTTKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagcagtcaatgatgatggacagagagaaggaaggaggacagaaagagaaa
ggggaggagacatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggtgggtcaggaggggtgtccaatgggttcccc
acgtccacagcgcagagccccaaggagggagcggggggtgtacccgcaggggccctcagg
acgctggtggtccagcagaccagtctggaccggccccgggagacctggagtaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaacgtgtggcgcttcccc
tacatctgctaccaaaacggcggaggggccttcctactcccctacatgttgatggcagta
ttcggcggcgtgcctctgttctacatggagctggcactggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtatatagcgttctactacaacaccatcatggcgtgggccctgtattac
ctcctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgcctccgctacctgtccaccgacagcaacgtcacctggaccaacacctccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtgcacatgtctccaggtctg
caccagcttggcagtgtgagttggcagctggctctctgtctcctgttcatcttcaccatt
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
acgttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctgcccggggcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacggta
tggattgatgcagcagctcagatcttcttctctctggggccaggtttcggggtgctcctg
gcctttgccagctacaacccctttcacaacaactgctacaaggatgcgttgatgaccagc
tcggtgaactgcctgaccagtttcctttctgggtttgtcatctttaccgtgctcggctac
atggctgagatgcgcaaaataggcgtggagaacgtagccaaggacgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttctttgccatc
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtcaaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgctacctgggagccctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtatgccacgggacctgctgtcatcactgtggtc
ttcctagaagtcatcgccgtttcctggttctacggcacgagtcgtttctgtgctgatgtc
catatgatgctgggcttctcccctggactgttctggaaggtgtgctgggtagccatctgc
cccatcttcctactgttcatcattgtcagtttcctggcgttccccccggaggtgaagttg
tttgactatgtctacccaccctggaccactgttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctatatggtgtaccacctgctcaccaccaaagggacctttaaa
cagcgtctcctgaagggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgctgtctga
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