Coregonus clupeaformis (lake whitefish): 121570508
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Entry
121570508 CDS
T08357
Name
(RefSeq) prostaglandin E2 receptor EP1 subtype-like
KO
K04258
prostaglandin E receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121570508
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121570508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121570508
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Prostaglandin
121570508
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Serpentine_r_xa
HXXEE
Gate
DUF4059
Motif
Other DBs
NCBI-GeneID:
121570508
NCBI-ProteinID:
XP_041737903
LinkDB
All DBs
Position
7:complement(24638832..24648266)
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AA seq
380 aa
AA seq
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MLAMQHYNSSGLAAPHLLPNQTRGVEGVPAMAWRANITERPMSPPSNPTAAGLSMTLGIL
SNIVALVILAKAYARLRRRSKATFLLFASSLVATDFAGHVIPGALVLRLYSAGSATGPLA
RAATDAPCQFLGGSMVFFGLCPLFLGCAMAAERCLGVTQPLLHASLVTTARTKMALALIW
LLALCVALLPFFRLGAYTYQYPWTWCFIRVLGETQETDVAFVMLFSGLGLASLTVALVCN
TISGVTLVLARLRKKCKTCYRRSAKSHDIEMVAQLVGIMITSCICWSPLLIFGLMSVTRS
YSGSIGSDQDTYRRLMVMGVRLASWNQILDPWVYILLRRAVLRKIYRITKSRASFKNSTF
RHWDISSFQNSEKINTVNRI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttggccatgcagcactacaactcctcaggcctggctgccccccatctcctccccaac
cagactaggggggtggagggggtgccggccatggcctggagggcaaacatcacagagagg
cccatgtctccccccagtaaccccacggcagccggcctctccatgaccctgggcatcctg
tccaacatcgtggccctggtcatcctggccaaagcctacgcccgcctgcgccgccgctcc
aaggccaccttcctgctcttcgccagctccctggtggccacggactttgccggccacgtc
atccccggtgccctggtgttgaggctgtactcagctgggtctgcgactgggcccttagct
cgcgctgccaccgatgccccctgccagttcctagggggtagcatggtgttcttcggcttg
tgcccattgttcctgggctgtgccatggctgctgagcgctgcctgggcgtcacacagccc
ctgctccatgcctcactggtcaccacggctcgcaccaagatggcgctggctctcatctgg
ctgctggctctgtgtgtggccctcctgcccttcttcaggctgggggcctacacctaccag
tacccctggacctggtgcttcatcagggtcctgggagagactcaggagacggacgtggcc
tttgtcatgctgttctctggactgggcctggcctctctgactgtggccctggtgtgtaat
accatcagtggggtcacgctggtgcttgccagactgcgtaagaagtgtaagacctgctac
cgtcgctcagccaagtcccacgacattgagatggtggcccagctggtgggcatcatgatc
acctcttgcatctgctggagccccctgctgatctttggcctgatgtcagtcacacggtcc
tacagcggttccataggcagtgaccaggacacatacaggaggttgatggtgatgggcgtc
cggctggcctcctggaaccagatcctggacccctgggtctacatcctgctgcgccgggcc
gtgctgagaaagatctaccgcatcaccaagagccgagccagcttcaagaacagcaccttc
cgccactgggacatcagctccttccagaactctgagaaaataaacactgtcaacaggatc
tga
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