Coregonus clupeaformis (lake whitefish): 121575056
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Entry
121575056 CDS
T08357
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575056
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
121575056
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121575056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Flg_hook
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
121575056
NCBI-ProteinID:
XP_041743797
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All DBs
Position
10:complement(44421245..44509074)
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AA seq
1128 aa
AA seq
DB search
MSSHTRVKKDKEIIGEYETQVKEIRNQLVEQFRCLEQQSESRLQLLQDLQDFFRRKAELQ
LEYSRGLDKLAERFSAKIRTSREHQHFKKDQNLLSTVNCWYLVLNQTRRESRDHATLSDL
YNNNVIFRLAHVGEDVIRLFKKSKDIGVQMHEELVKVTNELYTVMKTYHMYHTESISAES
KLKEAEKQEEKQIGKANDVSTSLLRHDDRPQRRSSVKKMEKMKEKRQAKYSENKLKCTKA
RNDYLLNLAATNALVAKYYIHDVSDMIDCCDMGYHPSLARTLRTYLSAEYSLETSRHEGL
DQLEGAVDAMDVRGDKHRVMDMHSQIFCPPARFDYQPHMGDEVCQVSAQQPMQTELLMRH
HQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSEAFQHSQSTESVKSASSDSY
MSKANVAKRRANQQETEGFYFTKFKEYLNGSNLIVKLQAKHDLLKQTLGEGERAEYGTTS
IRPPTLPPKPGRIRKPRPRSIFYLKLFKGNMEAFIKDSGQAIPVVVESCVRYINLYGLQQ
QGIFRIPGSQVEVNDIKNSFERGEDPLVDDQSDHDIMAVAGVLKLYFRGLETPLFPKERF
LDLMSTIKLDSGAERAHHLQQIVVTLSRPVIIVMRYLFAFLNHLSQYSDENMMDPYNLAT
CFGPTLMPIPDDHDPVACQTHVNEVIKTIIIHNEVIFPSHCELDGPVYEKCMAGGEEYCD
SPHSEPGAIDEVDNGTGPPTSDDELEQIEAIAKFDYVGRTPRELSFKKGASLLLYLRASD
DWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSGKAESEASSGPHQEDRDRTSSRNHDHD
RSSPCEHTQHTPEHRYGAALGRVRVRSDGAAIPHRRSTADTHSPTRGMDMPPRVIPRPCS
PHKMAVSRGHMDSPEKRHLGTFGSAGSINHPDRKCFPDGPVLRASPGSTRHGSLGDHKSL
EAEALAEDIEKTMNTALHELRELERQNVAKHAPDVVLDTLEPLKQQHPSSGGSGPPSEAC
GSPLHTNTMAIRDPDAALRRSSCSSSAETMSTFKPTARRPIAPLRPPPVRPLRPAPIHPG
HGQHRSSSSSSSGMGSPASITPTDRVFPKAPSPSPSTSSSSSDKQGNM
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcatacgagagtcaagaaggacaaggagattattggggaatacgagactcaa
gtgaaagagatccggaaccagttggtggagcagttccgttgtcttgagcagcagtcggag
tcccggctacagcttctgcaggacctgcaggacttcttccgccgcaaggccgagctgcag
ctggagtactccagaggcctggacaaactggccgagcgcttctccgccaagatacgcacc
tccagggaacatcagcactttaagaaggaccagaacctgctgtcgacagtgaactgttgg
tacctggttctgaaccagacaaggagagagagcagagaccatgctaccctcagcgacctc
tacaacaacaacgtcatcttccgcctggcacacgtcggagaggatgtcatcagactcttc
aaaaagagcaaagacatcggggtgcagatgcacgaggagttggtaaaagtcacgaatgag
ctctacactgtgatgaagacgtaccacatgtaccacacagagagcatcagcgctgagagc
aagctgaaggaggcggagaaacaggaagagaagcagattggcaaggccaatgatgtcagc
accagcctcttgcgccatgacgaccgcccacagcgacgcagctccgtcaagaagatggag
aagatgaaggagaagagacaagcaaaatactctgaaaacaagctgaagtgcactaaagcc
cggaacgactatttgttaaacctggccgcgaccaatgctctggtggccaaatattacatc
cacgatgtctctgacatgatagattgctgtgacatgggctaccatcccagcctggcgcgg
accctgaggacctacctgtctgcagagtacagcctggagacgtcccgccatgaggggctg
gaccagcttgagggggccgtggatgccatggatgtcaggggggacaaacacagggtcatg
gacatgcacagtcagatcttctgcccgcccgcacgcttcgactaccagccacacatgggc
gacgaggtgtgtcaggtgagtgcccagcagccaatgcagacagagctcctgatgcgtcac
caccagctccagtcccgcctggccacactcaagatagagaacgaggaggtaagaaagacc
ctggatgccaccatgcagactctgcaggacatgctgacggtggaggactttgatgtgtct
gaggctttccaacacagccagtccactgagtcggttaagtctgcctcgtctgactcctac
atgagcaaggccaacgttgctaagagacgagccaaccagcaggagacggagggcttctac
tttactaaattcaaagagtacctgaatggcagcaacctcatagtgaaactacaggccaag
catgatctactgaagcagacgctaggagaaggggaaagggctgaatatggaacaacaagc
atcaggccccccactcttccccctaaacccgggagaatacggaagcctagacctcgctcc
attttttatcttaaactctttaaaggcaatatggaggccttcatcaaggactctgggcag
gcaataccagtggtggttgagagctgtgtccgctacattaatctatatggccttcagcag
cagggcatattcaggattcctggctcccaggtcgaagtcaacgatataaaaaattcattt
gagagaggtgaggacccattggtggacgaccagagtgaccatgacatcatggcggtggca
ggtgttctgaagctgtacttcagggggctggagaccccactgttccccaaagaacgcttc
ctcgacctcatgtctaccatcaaactagactctggtgcagagagagctcatcaccttcag
cagatcgttgtaactctttctcgccctgtcatcatcgtcatgagatacctgtttgcattc
ctcaaccatctatcccagtacagtgatgagaacatgatggatccctacaacctggctacc
tgcttcggcccgactctgatgcccatacctgatgaccatgatcctgtggcctgccagacg
cacgttaatgaggtcatcaagaccatcatcatccacaacgaggtcatcttcccgagtcat
tgtgagctggacggaccggtctatgagaagtgcatggctggaggagaggagtactgtgac
agtccccatagtgagccaggtgccattgatgaagtggacaacggtacaggacctcccacc
agtgacgacgaactggagcagatcgaggccatcgctaagtttgactacgtggggcgtact
cccagagagctgtcctttaagaagggtgcatccctgctgttgtacctgagagcctctgat
gactggtgggagggacgacacaacggagtggatggactcatcccacatcagtacatcgtg
gtgcaggacatggacgatgcattctcagacagtctgagtgggaaggctgagagtgaagcc
agtagtggaccccaccaggaggacagagacaggacctcatcaaggaaccatgaccatgac
cgcagctccccctgcgaacacacacagcatacccctgaacaccgctatggagctgctttg
ggaagggtgagggttcgttcagatggtgctgctatccctcaccgcaggagcacagccgac
acccacagccccaccagaggtatggacatgccccctagggtcatacctcgcccctgcagc
cctcacaagatggccgtcagcaggggccacatggacagtccagagaaacgccatctcggc
acgttcggcagcgcaggaagtatcaaccacccagacaggaagtgcttccccgatggcccc
gtcctcagagcatcccccggctccacccgccatggtagccttggtgaccacaaatcactg
gaggccgaggccctggcagaggacatagagaagaccatgaacaccgccctgcacgagctg
cgtgagctggagcgtcagaacgtggccaagcacgctcccgatgtggtcctggacaccttg
gagcccctgaagcagcagcacccctcctccggtgggtccggacccccctctgaggcctgc
ggcagccccctccacactaacaccatggccatccgggaccctgacgctgccctacgccgt
agcagctgttcctcgtccgccgagacaatgagcaccttcaaaccgactgcacggaggccc
atcgcccccctgaggccgccaccggtcagacccctccggcctgcccccattcacccggga
catgggcagcaccggtccagtagttccagctcctcaggcatgggtagtccagcctctatc
acccccacagacagggtgttccccaaggcaccatccccgtccccctccacttcctcctcg
tcctcagacaaacagggtaacatgtag
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