Coregonus clupeaformis (lake whitefish): 121575353
Help
Entry
121575353 CDS
T08357
Symbol
pax7a
Name
(RefSeq) paired box protein Pax-7a isoform X1
KO
K09381
paired box protein 3/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575353 (pax7a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121575353 (pax7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121575353
NCBI-ProteinID:
XP_041744316
LinkDB
All DBs
Position
10:22116655..22175749
Genome browser
AA seq
519 aa
AA seq
DB search
MATLQGTVPRMMRPAPGQNYPRTGFPLEGQYAGPEYVYCGTVSTPLGQGRVNQLGGVFIN
GRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPR
QVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARF
GKKDDDDDCDKKDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTF
TAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAF
NHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSDGSS
AYGLSSNRHSFSSYSDSFMSQSVASNHMNPVSNGLSPQVMSILSNPNVVPSQSQHDFSIS
PLHGSLESSNPISASCSQRSDSIKGVDSLASSQSYCPPTYSATSYSVDPVTAGYQYSQYG
QTAVDYLAKNVSLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctactttacaaggaacagtgcctcgaatgatgcgccctgcgccaggccagaactac
ccccgcactggattccctctggaaggacaatatgcaggacctgaatatgtttattgtgga
acagtatcaacccccctgggccaaggtcgggtgaaccagctcggtggagtgttcatcaac
gggaggccgctgccaaatcatatcagacacaagatagtagagatggcacaccacggcatc
cgaccctgcgtaatctcgcgacagctacgagtttcccatggttgcgtctccaaaatcctc
tgtcggtaccaggagaccggttcgattcgtcccggggctataggaggcagcaagcccagg
caggtagcaactcccgacgtggagaagcggattgaggagtacaagcgagaaaaccccggg
atgttcagttgggaaattcgggacaagctgctgaaggacggggtgtgcgacagaagcact
gttccttcaggtgaggcttcatctgtcagttccatcagccgagttctgagggcccgattc
ggcaagaaagatgacgacgacgattgtgataagaaggatgaagacggggaaaagaaaaca
aagcatagcatcgatggcattctcggcgataaaggtaatcgtacagacgagggttcagat
gtggagtcggagccggaccttcccctgaagaggaagcagcgtcgaagccgcaccaccttc
acagctgagcagctggaggagctggagaaggcctttgagaggacacactacccagacatc
tacaccagggaagagctggcccagaggaccaagctcactgaggcccgtgtacaggtgtgg
ttcagcaacagaagggccagatggcgcaagcaggcaggagccaatcagctggccgccttc
aaccacctgttacctggaggcttcccgcccacggggatgcccagcttacctacctaccag
ctacctgagtcctcgtaccccggcactacactgtcacaggatggcagcagtacgttgcat
cggccccagcccctgcctccgtcctccatgcaccagggaggactctctgacggcagctcc
gcctacggcctctcgtccaatcgccacagcttctccagctactcagacagcttcatgagc
caatcagtggccagcaaccacatgaacccggtcagcaacggcctctccccacaggtgatg
agcatcctgagtaaccccaacgtggtgccctcccagtcccagcatgacttctccatctcc
cccctccacggcagcctggagtcctccaaccccatctcagccagctgcagccagcgctct
gactccatcaagggggtggacagcctggcttcctcccagtcctactgcccccccacctac
agcgccaccagctacagcgtggaccccgtcactgccggataccagtacagccagtatgga
cagactgcagttgactacctggctaagaacgtgagtctgtccacccagaggaggatgaag
ctgggagaccactctgctgtcctgggactgctgcaggtggagacgggacaggcctactga
DBGET
integrated database retrieval system
