Coregonus clupeaformis (lake whitefish): 121577056
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Entry
121577056 CDS
T08357
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04217
Necroptosis
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121577056
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121577056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121577056
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121577056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121577056
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
121577056
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
121577056
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
121577056
RhoA-dependent endocytosis
121577056
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
121577056
Retention of mitochondria
121577056
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121577056
BRITE hierarchy
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
FtsK_SpoIIIE
AAA_15
AAA_28
Motif
Other DBs
NCBI-GeneID:
121577056
NCBI-ProteinID:
XP_041746715
LinkDB
All DBs
Position
11:49993695..50021635
Genome browser
AA seq
713 aa
AA seq
DB search
MEALIPVINKLQDVFNTVGADIIQLPQIAVVGTQSSGKSSVLEALVGRDLLPRGTGVVTR
RPLILQLVHVDPEDRRKTSEENGVDGEEWGKFLHTKNKIYTDFDEIRLEIEAETERVSGN
NKGITDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIEVQIKDLIVKHISNPNSII
LAVTAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAGTDAMDVLMGRVIPVKLGL
IGVVNRSQLDINNKKTVADAIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCL
PELKTRINVLAAQYQSLLSSYGEPVEDQSSTLLQLITKFAAEYCHTIEGTAKYIETTELC
GGARICYIFHETFGRTLESVDPLGGLTTIDVLTAIRNATGPRPALFVPEVSFELLVKRQV
KRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNE
MVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRMRELPSSVPREKSFKGPGGQSL
SPTELPPPEGEGPKTAGGGPQGDQDGGTGNWRGMLKEGMGGDKSMLQTSNPASPQRGHAV
NLLDVPVPVSRKLSSREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQ
SELVGQLYKAGLLDDLLTESEDMAQRRNEAADMLKALQKASQVIAEIRETHLW
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccttatccctgtcatcaataaattacaagatgtgtttaatacagttggcgcg
gacattatccagctgccgcagattgctgttgttggaacgcagagcagtgggaagagttca
gtgctagaggctctggtgggcagagaccttctaccccggggtactggcgtcgtcacccgt
cggcccctcatcctccagctggtccacgtggacccagaggaccgcaggaagaccagcgag
gagaatggcgtcgatggagaggaatggggcaagtttctacacaccaaaaacaagatctac
acagacttcgatgaaatcaggcttgagatcgaagctgaaacagaaagagtttctggcaat
aacaagggaatcactgacgagcccattcacctgaagatcttctcccctcacgtagtcaac
ctcacactagtggatctgccaggtatcacaaaggtcccggtgggagaccagcccaaagac
atagaggtgcagatcaaagacttgatcgtgaagcacatctctaaccccaactctatcatc
ctggctgtgactgctgccaacacagacatggccacctcagaggcccttaaagttgcccgc
gaggtcgaccccgatggcaggaggacgttagcggtggtgaccaaactggacctgatggat
gctgggactgatgccatggacgttctgatgggccgggtcatccctgttaaacttggcctc
attggcgtggtcaacaggagtcagctggacatcaacaataagaagacagtggccgacgcc
atccgtgatgaatatgccttcctacagaagaagtacccctctctcgccaacagaaacgga
accaaatacctggctagaacattgaacaggttgttgatgcaccacatcagagactgtctc
ccggagctaaagactcgtatcaacgttctggcggcccagtaccagtccctgctaagcagc
tatggtgaacctgtagaagaccagagctccacactgctccagctcatcacaaagtttgct
gcagagtactgccacaccatcgagggcaccgccaagtacatagagacaaccgagctgtgt
ggtggagcacgaatctgttatattttccatgagacttttggtcggacgctggagtcagtg
gaccctctaggaggtctgaccaccatagatgtgctaacagctattagaaatgctacgggc
ccgcggcctgccctgtttgtgcctgaggtgtcgtttgagctgctagtgaagagacaggtg
aagagactggaggagcccagtctgcgctgtgtagagcttgtccacgaggagatgcagagg
atcatccagcactgctccaactacagcacacaggagctgttgaggtttccaaagctccat
gatgccatagtagaagtggtcacgtccctcctcaggaaacggttaccggtcaccaatgag
atggttcacaacctggtggccatagagttggcctatattaacaccaagcaccctgacttt
gctgatgcctgtggcctcatgaacaacaacatagaggaacaaagacgcaacagaatgaga
gagcttccctcttcagttcccagggaaaagtcctttaagggcccaggtggtcagtctctc
tcccccactgagcttcctccccccgagggagagggacccaagacagcaggtgggggtccc
cagggggaccaggatggagggacagggaactggaggggcatgctgaaggaggggatgggt
ggagataagtccatgctccagacctccaaccctgccagccctcagaggggccacgctgtc
aacctgctggatgtgcctgttcccgtttccaggaagctgtcgtcccgagagcagagggac
tgtgaggtcatcgagaggctcatcaagtcctacttcctcatcgtcaggaaaaacatccag
gacagtgtgcccaaggcagtgatgcacttcttagtgaaccatgtgaaagacagcctgcag
agtgagctggtgggccagctgtataaggcagggctgttggatgacctgctcactgagtct
gaagacatggcccagagacgcaatgaggctgcagacatgctcaaggccttgcagaaagcc
agtcaggtgattgctgaaatcagagaaacacacctgtggtga
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