Coregonus clupeaformis (lake whitefish): 121577576
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Entry
121577576 CDS
T08357
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3-like isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121577576
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
121577576
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121577576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
121577576
NCBI-ProteinID:
XP_041747235
LinkDB
All DBs
Position
12:36188770..36334599
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AA seq
1102 aa
AA seq
DB search
MSSQTRVKKDKEIIGEYETQVKEIRNQLVEQFKCLEQQSESRIQLLQDLQDFFRRKAEIQ
LEYSRSLEKLAERFSNKIRSSREHHQFKKDQHLLSSVNCWYLVLNQTRRESRDHATLNDI
YTNNVIVRLAQISEDVIRLFKKSKDIGIQMHEELVKVTNELYTVMKTYHMYHTESISAES
KLKDAEKQEEKQFSKSGDLNVHLLRHEDRPQRRSSVRKIEKMKEKRQAKYSENKLKCTKA
RNDYLLNLAATNAVVAKYYIHDVSDMIDCCDLGYHASLARTFRTYLSAEYNLETSRHEGL
DIVENAVDNLDSRSDKHKIMDMHNQVFCPPMRFEYLPHMGDEVCQVSAQQPVQTELLMRY
HQLQSRLTMLKIQNEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESIKSVASETY
MSKLNVAKRRANQQETEVFYFTKFKEFLNGSNLIIKLQAKHDLLKQTLGEGERAECGTTR
PPTLPPKPQKMRKPRPRSIYNHKLFNGNMETFIKDSGQPIPLVVESCIRHINLYGLQQQG
IFRVPGSQVEVNDIKNSFERGEDPLIEDQNEHDINSVAGVLKLYFRGLENPLFPKERFLD
LISTIKLESGAERAHHVQQIIVTLPRTVIIVMRYLFAFLNHLSQYSDENMMDPYNLAICF
GPTLMPIPDGQDPVAIQAHVNEVIKTIIIHNEVIFPSHRELDGPVYEKCMTGGEEYCDSP
HSEPGTIDEADNGTEPHTSDDELEQIEAIAKFDYVGRTPRELSFKKGASLLLYHRASEDW
WEGRHNGVDGLIPHQYIVVQDLDDAFSDNLSQKADSEASSGPLLDDKASSKNDVPSPCEH
SPDCNFGGVMGRVRLRSDGAAIPRHRSGETHSPPRGTDTPPRAAACPSSPQKVAVSRSYM
ESPEKRRLGTFGSAGSINYADRKAYPEGHPLRHVPGATRHSSLGDHKSLEADTLAEDIEK
TMTTALHELRELERQNTGKQAPDVVLDTLDTTMKNPVNSEPGSPLHTIMIRDPDAAMRRS
SSSTSEMMSTFKPALSARLAGAQLRPPPMRPVRPPPTGHRSSSSSSSGVGSPAVTPTEKI
FPNSTAVASSAANAAGDQSGTM
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaactagagtcaagaaggacaaggagatcataggagaatatgaaacgcaa
gtcaaagagatccgtaaccagctggtggagcagttcaaatgcctggagcagcagtccgag
tctcgtatccagctgctgcaggacctgcaggacttcttccgccgcaaggctgagatccag
ctggagtactcccgcagcctggagaaactggcagagcgattctccaacaagatccgcagc
tccagagaacaccaccagttcaagaaggaccagcacctgctgtccagtgtgaactgctgg
tacctggtactgaaccagaccaggagggagagcagggaccacgccaccctcaatgacatc
tacaccaacaacgtcatcgtccgccttgcccagatcagcgaggatgtcatccgcctcttc
aagaagagcaaggacattgggattcagatgcacgaggagctggttaaagtgacaaacgaa
ctctacactgtgatgaagacctaccacatgtaccacacagagagcatcagcgctgagagc
aagctgaaggacgctgagaagcaggaggagaagcagttcagtaagtctggtgacctcaac
gtacacctgctgcgccacgaggaccggccccagagacgcagctctgtcaggaagatcgag
aagatgaaggagaagagacaagccaagtactccgaaaacaagctgaagtgcactaaagcc
cgcaatgactatttgttgaacctggcagcaacgaatgccgttgtggcgaaatactacatc
cacgatgtctctgatatgattgattgctgcgaccttggctaccatgccagcctggcacgt
actttcaggacctatctgtcagctgagtacaacctggagactagtcggcatgagggcctg
gacatcgtcgagaatgccgtggacaacctggactcccgcagtgacaagcacaagatcatg
gacatgcacaaccaggtgttctgccctcccatgcgcttcgagtacctgccccacatgggg
gacgaggtgtgccaggtgagtgcccagcagccagtgcagactgagctcctgatgcgctac
caccagctgcagtcccgcctgaccatgctcaagatccagaacgaagaggtgaggaagact
ctggacgccaccatgcagacgctgcaggacatgctgactgtggaggactttgatgtgtcc
gatgccttccagcatagccgctccactgagtccatcaagtctgtggcctctgagacctac
atgagcaaactgaacgtggccaagagacgggccaaccagcaggagacagaggtcttctac
ttcactaaattcaaggagttcctgaacggcagcaacctcatcattaaactgcaggccaag
catgacctcctgaagcagacactgggagaaggagaaagggctgaatgtgggactacgagg
ccccccactctaccccctaaaccacagaaaatgcggaagcctaggccgcgctccatctat
aaccataaactgtttaacggcaatatggagaccttcatcaaggattcaggtcaacctatt
cctcttgtggttgagagctgtattcgacacatcaatttgtatgggctccagcagcagggc
atattccgtgtgcctggatcccaggtggaggtcaatgatattaaaaactcatttgagaga
ggtgaagacccattgattgaagaccagaatgaacatgacatcaactcagtggcaggggtc
ctcaagctgtacttcaggggcctggagaaccctctgttccccaaggaacgcttcctggac
ctcatttctactatcaaactggagtctggagctgagagagcgcatcacgtccagcagatt
attgtgactcttcctcgcaccgtcatcatcgtcatgagatacctgttcgcgttcctcaat
cacctatcccagtacagcgatgagaacatgatggatccctataacctggccatctgcttt
ggccccaccctgatgcccatccccgacggacaggaccctgtagccatccaggcgcatgtc
aatgaggtcatcaagaccatcatcatccacaacgaggtcatcttccccagccaccgtgag
ctggacgggccggtctatgagaagtgcatgactggaggagaggagtactgtgacagcccc
cacagtgagccaggcaccatcgatgaggctgacaacgggaccgagccacacaccagtgat
gacgagttggagcagattgaggccatcgctaagtttgactatgtggggcgcaccccccgg
gagctgtcctttaagaagggagcgtcactgctgctgtatcaccgcgcctctgaggactgg
tgggaggggcggcacaacggtgtggacggactgatcccacatcagtacatcgtggtgcag
gacctggatgatgcattctcagataatctcagtcagaaggcggacagcgaggcgagcagc
ggaccactgctggatgacaaggcctcatccaaaaatgacgtcccatcaccgtgtgaacac
tcccccgactgcaactttggaggagtcatggggagggtgaggctacgttctgacggggcc
gccatccctcggcaccgcagcggagagacccacagccctccccggggtacagacacaccc
ccgcgggccgcagcctgtcccagtagcccccagaaggtggcggtgagcaggagttacatg
gagagcccggagaagaggcgcctgggcacatttggcagcgcgggcagcatcaactatgcc
gacaggaaggcctatcccgagggccaccccctgaggcacgtaccaggggccacacgccac
agcagtctcggggaccacaaatcactggaggctgataccctggcagaggacatagagaag
accatgaccacggccctacatgagctgcgtgagctggagcgccaaaacacgggcaagcag
gcgccagatgtggtgctggacaccctggacaccaccatgaagaaccctgtgaactcggag
cccggcagccccctccacaccatcatgatccgcgacccggatgccgccatgcgccgcagc
agcagctccacctctgagatgatgtccaccttcaagcctgccctgtcggcccgtctggcc
ggagcccagctgcgccccccgcccatgaggcccgtccgcccgccccccaccgggcaccgc
tcctccagctccagttcctccggggtaggaagccctgctgtcacccccaccgagaagatc
ttccccaacagcactgccgtggctagctccgcagctaacgcagctggggaccagtcaggc
accatgtag
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